RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
SSRP1-201ENST00000278412 FAM205AQ6ZU69 1335 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 BAZ2BQ9UIF8 2168 aaKnown RBP13.85□□□□□ -0.19
SSRP1-201ENST00000278412 MAST2Q6P0Q8 1798 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 PRELPP51888 382 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 PICALMQ13492 652 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 FAM47AQ5JRC9 791 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 PKNOX2Q96KN3 472 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 DDX4Q9NQI0 724 aaKnown RBP13.84□□□□□ -0.19
SSRP1-201ENST00000278412 GJB4Q9NTQ9 266 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 MKRN1Q9UHC7 482 aaKnown RBP13.84□□□□□ -0.19
SSRP1-201ENST00000278412 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
SSRP1-201ENST00000278412 POLD1P28340 1107 aa13.83□□□□□ -0.19
SSRP1-201ENST00000278412 PDIA3P30101 505 aaKnown RBP13.83□□□□□ -0.19
SSRP1-201ENST00000278412 DACT2Q5SW24 774 aa13.83□□□□□ -0.19
SSRP1-201ENST00000278412 SPTY2D1Q68D10 685 aaPredicted RBP13.83□□□□□ -0.19
SSRP1-201ENST00000278412 ZFPM1Q8IX07 1006 aa13.83□□□□□ -0.19
SSRP1-201ENST00000278412 NACAP1Q9BZK3 213 aa13.83□□□□□ -0.19
SSRP1-201ENST00000278412 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.2
SSRP1-201ENST00000278412 USP5P45974 858 aa13.83□□□□□ -0.2
SSRP1-201ENST00000278412 RASSF7Q02833 373 aa13.83□□□□□ -0.2
SSRP1-201ENST00000278412 KIAA2012Q0VF49 1180 aa13.83□□□□□ -0.2
SSRP1-201ENST00000278412 NFIAQ12857 509 aa13.83□□□□□ -0.2
SSRP1-201ENST00000278412 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
SSRP1-201ENST00000278412 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
SSRP1-201ENST00000278412 CRNKL1Q9BZJ0 848 aaKnown RBP13.83□□□□□ -0.2
SSRP1-201ENST00000278412 ZNF646O15015 1829 aaPredicted RBP13.83□□□□□ -0.2
SSRP1-201ENST00000278412 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 MCM5P33992 734 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 TPRNQ4KMQ1 711 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 GNAT2P19087 354 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 FAM173BQ6P4H8 233 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 IGDCC4Q8TDY8 1250 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 GTF3C6Q969F1 213 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 AGXT2Q9BYV1 514 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 PIM2Q9P1W9 311 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 RANBP6O60518 1105 aaKnown RBP13.82□□□□□ -0.2
SSRP1-201ENST00000278412 SYT1P21579 422 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 RASGRP2Q7LDG7 609 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 EYA3Q99504 573 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
SSRP1-201ENST00000278412 NFKBIEO00221 500 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 TCHHQ07283 1943 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 CCDC93Q567U6 631 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 FERMT3Q86UX7 667 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 MICU3Q86XE3 530 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 STAG1Q8WVM7 1258 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
SSRP1-201ENST00000278412 TRDNQ13061 729 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 SHROOM1Q2M3G4 852 aaPredicted RBP13.81□□□□□ -0.2
SSRP1-201ENST00000278412 APOBEC3HQ6NTF7 200 aaKnown RBP13.81□□□□□ -0.2
SSRP1-201ENST00000278412 LY9Q9HBG7 655 aa13.81□□□□□ -0.2
SSRP1-201ENST00000278412 GAKO14976 1311 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 FLT1P17948 1338 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 PODNQ7Z5L7 613 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 INTS4Q96HW7 963 aaKnown RBP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 TIAM2Q8IVF5 1701 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 PSMD14O00487 310 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 HMGB1P09429 215 aaKnown RBP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 CDC27P30260 824 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 TCP10Q12799 353 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 DALRD3Q5D0E6 543 aaKnown RBP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 CCDC82Q8N4S0 544 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 AIFM3Q96NN9 605 aa13.8□□□□□ -0.2
SSRP1-201ENST00000278412 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
SSRP1-201ENST00000278412 ZMYM6O95789 1325 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
SSRP1-201ENST00000278412 WDHD1O75717 1129 aaPredicted RBP13.79□□□□□ -0.2
SSRP1-201ENST00000278412 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 CLEC10AQ8IUN9 316 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 SH2B1Q9NRF2 756 aaPredicted RBP13.79□□□□□ -0.2
SSRP1-201ENST00000278412 USP17L3A6NCW0 530 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 USP17L4A6NCW7 530 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 PFKFB2O60825 505 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 MCM4P33991 863 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 CRKP46108 304 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 PPP4CP60510 307 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 USP17L1Q7RTZ2 530 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 NSUN7Q8NE18 718 aaKnown RBP13.79□□□□□ -0.2
SSRP1-201ENST00000278412 TBC1D22AQ8WUA7 517 aa13.79□□□□□ -0.2
SSRP1-201ENST00000278412 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
SSRP1-201ENST00000278412 VPS37CA5D8V6 355 aaPredicted RBP13.78□□□□□ -0.2
SSRP1-201ENST00000278412 BRD1O95696 1058 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 ANKRD1Q15327 319 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms