RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 SHC4Q6S5L8 630 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 DHX32Q7L7V1 743 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 RAB11FIP4Q86YS3 637 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 CARD10Q9BWT7 1032 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 MED4Q9NPJ6 270 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 NCAPD2Q15021 1401 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 SHOX2O60902 331 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 YEATS4O95619 227 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 GCP02774 474 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 GSPT2Q8IYD1 628 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 ZNF622Q969S3 477 aaKnown RBP eCLIP10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 LRRC59Q96AG4 307 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 HPCAL4Q9UM19 191 aa10.48□□□□□ -0.73
HMGCLL1-201ENST00000274901 POTEB2H3BUK9 544 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 CCDC175P0C221 793 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 ZNF18P17022 549 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 SCP2P22307 547 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 SYKP43405 635 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 TEFQ10587 303 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 ZNF827Q17R98 1081 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 KIF4BQ2VIQ3 1234 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 IP6K1Q92551 441 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 AGXT2Q9BYV1 514 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 AGPSO00116 658 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 TEX33O43247 280 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 BRD2P25440 801 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 ZC3H6P61129 1189 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 PROSER3Q2NL68 480 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 LONRF3Q496Y0 759 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 ANO1Q5XXA6 986 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 ACRBPQ8NEB7 543 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-201ENST00000274901 MYO1FO00160 1098 aa10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 ZMYND10O75800 440 aa10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 GGCXP38435 758 aa10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 IRAK1P51617 712 aa10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 SAMSN1Q9NSI8 373 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-201ENST00000274901 GRIN2DO15399 1336 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CTAGE15A4D2H0 777 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 KIF5CO60282 957 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CTAGE8P0CG41 777 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 MYBL2P10244 700 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CTAGE6Q86UF2 777 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CTAGE4Q8IX94 777 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CNPY4Q8N129 248 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 KCNH5Q8NCM2 988 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CABLES1Q8TDN4 633 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CPLX3Q8WVH0 158 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 JPH2Q9BR39 696 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 RAI14Q9P0K7 980 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 DBNLQ9UJU6 430 aaKnown RBP10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 MAP3K2Q9Y2U5 619 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 NFE2L3Q9Y4A8 694 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 SAMM50Q9Y512 469 aa10.46□□□□□ -0.74
HMGCLL1-201ENST00000274901 CCDC196A0A1B0GTZ2 297 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 CTAGE9A4FU28 777 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 A1BGP04217 495 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 AMPD2Q01433 879 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 RBL2Q08999 1139 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 G3BP1Q13283 466 aaKnown RBP eCLIP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 DDX46Q7L014 1031 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 ARHGEF25Q86VW2 580 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 AIFM3Q96NN9 605 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 LTN1O94822 1766 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 ZNF335Q9H4Z2 1342 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 MST1RQ04912 1400 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 NFAT5O94916 1531 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 ARHGAP25P42331 645 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 FNTAP49354 379 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 WDR93Q6P2C0 686 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 PRPF38AQ8NAV1 312 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 SMARCC1Q92922 1105 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 C8orf76Q96K31 380 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
HMGCLL1-201ENST00000274901 LMTK3Q96Q04 1460 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 E7EWF7 191 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 KIF1CO43896 1103 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 AKAP17AQ02040 695 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 NR1I3Q14994 352 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 SLC39A14Q15043 492 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 SPECC1Q5M775 1068 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 OLFM4Q6UX06 510 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 APTXQ7Z2E3 356 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 HINFPQ9BQA5 517 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 VIPAS39Q9H9C1 493 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 HDAC6Q9UBN7 1215 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 MED1Q15648 1581 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 AKR1B15C9JRZ8 316 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms