RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.74
PDGFC-201ENST00000274071 ADAMTS13Q76LX8 1427 aa10.46□□□□□ -0.74
PDGFC-201ENST00000274071 KIF24Q5T7B8 1368 aa10.46□□□□□ -0.74
PDGFC-201ENST00000274071 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.74
PDGFC-201ENST00000274071 PES1O00541 588 aaKnown RBP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 AHCYL1O43865 530 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 MAP4K4O95819 1239 aaPredicted RBP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 PDCP20941 246 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 FANCCQ00597 558 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 AMOTQ4VCS5 1084 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 NOA1Q8NC60 698 aaKnown RBP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 COG1Q8WTW3 980 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 RGL1Q9NZL6 768 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 C3P01024 1663 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 ROBO2Q9HCK4 1378 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 SMNDC1O75940 238 aaKnown RBP eCLIP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 ATP1A3P13637 1013 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 CD151P48509 253 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 NCAPHQ15003 741 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 RBM12BQ8IXT5 1001 aaKnown RBP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 GDAP1L1Q96MZ0 367 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
PDGFC-201ENST00000274071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.45□□□□□ -0.74
PDGFC-201ENST00000274071 BIN1O00499 593 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 FBLN1P23142 703 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CWF19L1Q69YN2 538 aaKnown RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CC2D2BQ6DHV5 1058 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 NSMCE1Q8WV22 266 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 DPF2Q92785 391 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 KIF20BQ96Q89 1820 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CPSF1Q10570 1443 aaKnown RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 GIGYF1O75420 1035 aaPredicted RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 OATP04181 439 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 PAPOLAP51003 745 aaKnown RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 MICALCLQ6ZW33 695 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 ENGASEQ8NFI3 743 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 DESI2Q9BSY9 194 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CPS1P31327 1500 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 DIAPH1O60610 1272 aaKnown RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CDC25CP30307 473 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 CEBPZQ03701 1054 aaKnown RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 ADCK5Q3MIX3 580 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 SPAG5Q96R06 1193 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 BPIFA3Q9BQP9 254 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 RMI1Q9H9A7 625 aa10.44□□□□□ -0.74
PDGFC-201ENST00000274071 MRPL44Q9H9J2 332 aaKnown RBP10.44□□□□□ -0.74
PDGFC-201ENST00000274071 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 ERICH2A1L162 156 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 CTAGE15A4D2H0 777 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 PFKFB2O60825 505 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 FMNL1O95466 1100 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 CTAGE8P0CG41 777 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 ATP5JP18859 108 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 EIF2S2P20042 333 aaKnown RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 TSHZ1Q6ZSZ6 1077 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 CTAGE6Q86UF2 777 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 MFN1Q8IWA4 741 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 CTAGE4Q8IX94 777 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 RASSF8Q8NHQ8 419 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 FAM81AQ8TBF8 368 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 CCDC114Q96M63 670 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 ZNF396Q96N95 335 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 PAGR1Q9BTK6 254 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 LSG1Q9H089 658 aaKnown RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 TMEM165Q9HC07 324 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 TPP2P29144 1249 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 UBASH3AP57075 661 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 SETDB1Q15047 1291 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 RINLQ6ZS11 566 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 SLX1AQ9BQ83 275 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 HSD3B7Q9H2F3 369 aa10.43□□□□□ -0.74
PDGFC-201ENST00000274071 PAPOLBQ9NRJ5 636 aaKnown RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 CORO1CQ9ULV4 474 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 EDC4Q6P2E9 1401 aaKnown RBP10.43□□□□□ -0.74
PDGFC-201ENST00000274071 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
PDGFC-201ENST00000274071 PNPLA6Q8IY17 1366 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 STX10O60499 249 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 IFT88Q13099 833 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 NME9Q86XW9 330 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 ARHGEF1Q92888 912 aaKnown RBP10.42□□□□□ -0.74
PDGFC-201ENST00000274071 ACSBG1Q96GR2 724 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 OSBPL9Q96SU4 736 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 MEIS3Q99687 375 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 LZTFL1Q9NQ48 299 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 FANCLQ9NW38 375 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 ADGRL3Q9HAR2 1447 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 HMMRO75330 724 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 TOP1P11387 765 aaKnown RBP10.42□□□□□ -0.74
PDGFC-201ENST00000274071 PDCLQ13371 301 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 NAA35Q5VZE5 725 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 BRAPQ7Z569 592 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 VSTM4Q8IW00 320 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms