RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 RIMBP2O15034 1052 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 ERFEQ4G0M1 354 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 CEP131Q9UPN4 1083 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 ELP1O95163 1332 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 NEDD4P46934 1319 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 KARSQ15046 597 aaKnown RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 USPL1Q5W0Q7 1092 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 RPGRQ92834 1020 aaKnown RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 ZHX1Q9UKY1 873 aaPredicted RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 TNKSO95271 1327 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 KIF28PB7ZC32 967 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 PPARAQ07869 468 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 AK7Q96M32 723 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 ATP1A3P13637 1013 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 FANCCQ00597 558 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 SOGA3Q5TF21 947 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 MROH5Q6ZUA9 1318 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 CAVIN2O95810 425 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 GNG11P61952 73 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 NAA30Q147X3 362 aaPredicted RBP14.37□□□□□ -0.11
UBXN4-201ENST00000272638 CCDC144BQ3MJ40 725 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 TEX35Q5T0J7 233 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
UBXN4-201ENST00000272638 SERTAD1Q9UHV2 236 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 U2AF2P26368 475 aaKnown RBP eCLIP14.37□□□□□ -0.118e-7■■□□□ 12.3
UBXN4-201ENST00000272638 CDC25AP30304 524 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
UBXN4-201ENST00000272638 PDE4BQ07343 736 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 SKIDA1Q1XH10 827 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 PKNOX2Q96KN3 472 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 STRBPQ96SI9 672 aaKnown RBP14.37□□□□□ -0.11
UBXN4-201ENST00000272638 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
UBXN4-201ENST00000272638 MTERF4Q7Z6M4 381 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 MON2Q7Z3U7 1717 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 WTIPA6NIX2 430 aaPredicted RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 TSPY3P0CV98 308 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 TSPY8P0CW00 308 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 CASP1P29466 404 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 CCT6AP40227 531 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 EXOSC10Q01780 885 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 ENOX2Q16206 610 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 TPTE2Q6XPS3 522 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 UBXN4Q92575 508 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 BLZF1Q9H2G9 400 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 BCL2L12Q9HB09 334 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 DACH1Q9UI36 760 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 SLIT1O75093 1534 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 FDPSP14324 419 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 HIBADHP31937 336 aaKnown RBP14.36□□□□□ -0.11
UBXN4-201ENST00000272638 CASP7P55210 303 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 KIAA1524Q8TCG1 905 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 CDK5RAP3Q96JB5 506 aa14.36□□□□□ -0.11
UBXN4-201ENST00000272638 GSDMDP57764 484 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 TRMT1LQ7Z2T5 733 aaKnown RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 MYRIPQ8NFW9 859 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 CCNL1Q9UK58 526 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 RTCBQ9Y3I0 505 aaKnown RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 PCDHA5Q9Y5H7 936 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 MYL5Q02045 173 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 PARP10Q53GL7 1025 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 NOC3LQ8WTT2 800 aaKnown RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 PIK3C2AO00443 1686 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 COL15A1P39059 1388 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 ZMYM6O95789 1325 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 YEATS4O95619 227 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 GUCY1A2P33402 732 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 ANTXR2P58335 489 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 RPS8P62241 208 aaKnown RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 CCDC47Q96A33 483 aaKnown RBP14.35□□□□□ -0.11
UBXN4-201ENST00000272638 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
UBXN4-201ENST00000272638 MAPKAPK5Q8IW41 473 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 TMTC2Q8N394 836 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 ZMYND15Q9H091 742 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 LZTFL1Q9NQ48 299 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
UBXN4-201ENST00000272638 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 IDEP14735 1019 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 UBA7P41226 1012 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 N4BP3O15049 544 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 GNAT2P19087 354 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 NOSTRINQ8IVI9 506 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 SMARCC2Q8TAQ2 1214 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 RASGRP4Q8TDF6 673 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 KCNF1Q9H3M0 494 aa14.34□□□□□ -0.11
UBXN4-201ENST00000272638 ERICH4A6NGS2 130 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms