RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 KRT23Q9C075 422 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 PPFIA3O75145 1194 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 GTF2IP78347 998 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 MXD3Q9BW11 206 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
SDE2-201ENST00000272091 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 ATP8A2Q9NTI2 1148 aa14.26□□□□□ -0.13
SDE2-201ENST00000272091 GSE1Q14687 1217 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
SDE2-201ENST00000272091 GAKO14976 1311 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 VPS37CA5D8V6 355 aaPredicted RBP14.25□□□□□ -0.13
SDE2-201ENST00000272091 GSTO1P78417 241 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 RRP12Q5JTH9 1297 aaKnown RBP14.25□□□□□ -0.13
SDE2-201ENST00000272091 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 KCNQ5Q9NR82 932 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 FAM217BQ9NTX9 383 aaPredicted RBP14.25□□□□□ -0.13
SDE2-201ENST00000272091 NID2Q14112 1375 aa14.25□□□□□ -0.13
SDE2-201ENST00000272091 GPR75-ASB3A0A0A6YYF3 556 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 PRPF40AO75400 957 aaKnown RBP14.24□□□□□ -0.13
SDE2-201ENST00000272091 USP17L8P0C7I0 530 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 GPT2Q8TD30 523 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 ZC3H12CQ9C0D7 883 aaKnown RBP14.24□□□□□ -0.13
SDE2-201ENST00000272091 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
SDE2-201ENST00000272091 PSME4Q14997 1843 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 MYH1P12882 1939 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 KCNA3P22001 575 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 LIFRP42702 1097 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 RHBDL3P58872 404 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 GDPD2Q9HCC8 539 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 CNPY2Q9Y2B0 182 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 RXRAP19793 462 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 CDC27P30260 824 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 BTDP43251 543 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 SEC23AQ15436 765 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 TBC1D22AQ8WUA7 517 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
SDE2-201ENST00000272091 MYL10Q9BUA6 226 aa14.24□□□□□ -0.13
SDE2-201ENST00000272091 RNF41Q9H4P4 317 aaPredicted RBP14.24□□□□□ -0.13
SDE2-201ENST00000272091 BRCA1P38398 1863 aaKnown RBP14.23□□□□□ -0.13
SDE2-201ENST00000272091 PRDM1O75626 825 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 CNKSR1Q969H4 720 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 COL4A5P29400 1685 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 GOLGA6L22H0YM25 854 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 PTMSP20962 102 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 DBNDD1Q9H9R9 158 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
SDE2-201ENST00000272091 GOLGB1Q14789 3259 aaKnown RBP14.23□□□□□ -0.13
SDE2-201ENST00000272091 IFIT3O14879 490 aaKnown RBP14.23□□□□□ -0.13
SDE2-201ENST00000272091 FERMT3Q86UX7 667 aa14.23□□□□□ -0.13
SDE2-201ENST00000272091 GZF1Q9H116 711 aaPredicted RBP14.23□□□□□ -0.13
SDE2-201ENST00000272091 PDCP20941 246 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 SLC4A8Q2Y0W8 1093 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 TOMM22Q9NS69 142 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 DAGLAQ9Y4D2 1042 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
SDE2-201ENST00000272091 RESTQ13127 1097 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 KLHL40Q2TBA0 621 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 FAM173BQ6P4H8 233 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 ORC4O43929 436 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 LDHCP07864 332 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 ADD1P35611 737 aaKnown RBP14.22□□□□□ -0.13
SDE2-201ENST00000272091 HMGN5P82970 282 aaKnown RBP14.22□□□□□ -0.13
SDE2-201ENST00000272091 NTRK3Q16288 839 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 SLC16A10Q8TF71 515 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 MCM9Q9NXL9 1143 aa14.22□□□□□ -0.13
SDE2-201ENST00000272091 GADD45BO75293 160 aaPredicted RBP14.21□□□□□ -0.13
SDE2-201ENST00000272091 USP48Q86UV5 1035 aa14.21□□□□□ -0.13
SDE2-201ENST00000272091 EYA3Q99504 573 aa14.21□□□□□ -0.13
SDE2-201ENST00000272091 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
SDE2-201ENST00000272091 RANBP6O60518 1105 aaKnown RBP14.21□□□□□ -0.14
SDE2-201ENST00000272091 BAG3O95817 575 aa14.21□□□□□ -0.14
SDE2-201ENST00000272091 FOSBP53539 338 aa14.21□□□□□ -0.14
SDE2-201ENST00000272091 MICU3Q86XE3 530 aa14.21□□□□□ -0.14
SDE2-201ENST00000272091 CCDC144CPQ8IYA2 1237 aa14.21□□□□□ -0.14
SDE2-201ENST00000272091 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.14
SDE2-201ENST00000272091 ESR2Q92731 530 aa14.21□□□□□ -0.14
SDE2-201ENST00000272091 TNKSO95271 1327 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 USP5P45974 858 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 METAP2P50579 478 aaKnown RBP eCLIP14.2□□□□□ -0.14
SDE2-201ENST00000272091 MAPKAPK5Q8IW41 473 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 FBXW7Q969H0 707 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 PCP11498 1178 aaKnown RBP14.2□□□□□ -0.14
SDE2-201ENST00000272091 DPEP1P16444 411 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 DYNLL2Q96FJ2 89 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 SUGT1Q9Y2Z0 365 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 FLT1P17948 1338 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 F8W031 263 aaPredicted RBP14.2□□□□□ -0.14
SDE2-201ENST00000272091 ZBTB43O43298 467 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 C21orf2O43822 256 aa14.2□□□□□ -0.14
SDE2-201ENST00000272091 ECE2O60344 883 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms