RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 HHIPL2Q6UWX4 724 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 VPS37DQ86XT2 251 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 ZFPM1Q8IX07 1006 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 ERO1AQ96HE7 468 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
TPM3-201ENST00000271850 DAGLAQ9Y4D2 1042 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 BTBD19C9JJ37 291 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 EN2P19622 333 aaPredicted RBP11.22□□□□□ -0.61
TPM3-201ENST00000271850 ADORA1P30542 326 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 ALDH1L2Q3SY69 923 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 ARSIQ5FYB1 569 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 SZT2Q5T011 3432 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 FKBP1CQ5VVH2 108 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 CDC42EP5Q6NZY7 148 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 MIGA2Q7L4E1 593 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 LPIN2Q92539 896 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 ADGRA2Q96PE1 1338 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 WRNIP1Q96S55 665 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 SIL1Q9H173 461 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 EFCC1Q9HA90 598 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 PTCH2Q9Y6C5 1203 aa11.22□□□□□ -0.61
TPM3-201ENST00000271850 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
TPM3-201ENST00000271850 IFIT1P09914 478 aaKnown RBP11.21□□□□□ -0.61
TPM3-201ENST00000271850 PHKA1P46020 1223 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 TNNI2P48788 182 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 GTF2A2P52657 109 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 TAF1CQ15572 869 aaPredicted RBP11.21□□□□□ -0.61
TPM3-201ENST00000271850 ZNF333Q96JL9 665 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 MEIS3Q99687 375 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 SMC4Q9NTJ3 1288 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 ZNF112Q9UJU3 913 aa11.21□□□□□ -0.61
TPM3-201ENST00000271850 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
TPM3-201ENST00000271850 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
TPM3-201ENST00000271850 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
TPM3-201ENST00000271850 CIAO1O76071 339 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 SLC5A1P13866 664 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 OTUD7BQ6GQQ9 843 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 ERO1BQ86YB8 467 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 TNNQ9UQP3 1299 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 CSADQ9Y600 493 aa11.2□□□□□ -0.62
TPM3-201ENST00000271850 LRRFIP2Q9Y608 721 aaKnown RBP11.2□□□□□ -0.62
TPM3-201ENST00000271850 MAST3O60307 1309 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 TLR2O60603 784 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 TCP10Q12799 353 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 PPIL2Q13356 520 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 WDR66Q8TBY9 1149 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 FAM151AQ8WW52 585 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 ZFYVE28Q9HCC9 887 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 KCNH4Q9UQ05 1017 aa11.19□□□□□ -0.62
TPM3-201ENST00000271850 GAKO14976 1311 aa11.18□□□□□ -0.62
TPM3-201ENST00000271850 PHF20L1A8MW92 1017 aa11.18□□□□□ -0.62
TPM3-201ENST00000271850 UBTFL1P0CB47 393 aaPredicted RBP11.18□□□□□ -0.62
TPM3-201ENST00000271850 LACTBP83111 547 aaPredicted RBP11.18□□□□□ -0.62
TPM3-201ENST00000271850 NOL9Q5SY16 702 aaKnown RBP11.18□□□□□ -0.62
TPM3-201ENST00000271850 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
TPM3-201ENST00000271850 C17orf99Q6UX52 265 aa11.18□□□□□ -0.62
TPM3-201ENST00000271850 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.18□□□□□ -0.62
TPM3-201ENST00000271850 ZNF341Q9BYN7 854 aa11.18□□□□□ -0.62
TPM3-201ENST00000271850 COPRSQ9NQ92 184 aa11.18□□□□□ -0.62
TPM3-201ENST00000271850 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
TPM3-201ENST00000271850 PHIPQ8WWQ0 1821 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 DOCK2Q92608 1830 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
TPM3-201ENST00000271850 CETPP11597 493 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
TPM3-201ENST00000271850 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
TPM3-201ENST00000271850 PPATQ06203 517 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 SNAPC2Q13487 334 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 RASGRF1Q13972 1273 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 ZCCHC17Q9NP64 241 aaKnown RBP11.17□□□□□ -0.62
TPM3-201ENST00000271850 TMOD2Q9NZR1 351 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
TPM3-201ENST00000271850 MYH2Q9UKX2 1941 aa11.17□□□□□ -0.62
TPM3-201ENST00000271850 PTPRFP10586 1907 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
TPM3-201ENST00000271850 DDTLA6NHG4 134 aaPredicted RBP11.16□□□□□ -0.62
TPM3-201ENST00000271850 WDHD1O75717 1129 aaPredicted RBP11.16□□□□□ -0.62
TPM3-201ENST00000271850 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
TPM3-201ENST00000271850 TIMM10P62072 90 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 DCAF15Q66K64 600 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 SHISA4Q96DD7 197 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
TPM3-201ENST00000271850 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 USP40Q9NVE5 1235 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 CPA4Q9UI42 421 aa11.16□□□□□ -0.62
TPM3-201ENST00000271850 CEP290O15078 2479 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 PDHXO00330 501 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms