RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 RAPGEF1Q13905 1077 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
LAMA3-201ENST00000269217 ZEB2O60315 1214 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 MXRA7P84157 204 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 NUP58Q9BVL2 599 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 FRMD4BQ9Y2L6 1034 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 CEP83Q9Y592 693 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.58
LAMA3-201ENST00000269217 ARHGEF10O15013 1369 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 BRD1O95696 1058 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 TERF1P54274 439 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 PAK1Q13153 545 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 TTC38Q5R3I4 469 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 JAKMIP2Q96AA8 810 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 NAP1L3Q99457 506 aaPredicted RBP11.46□□□□□ -0.58
LAMA3-201ENST00000269217 PPP1R7Q15435 360 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 TEX11Q8IYF3 940 aa11.46□□□□□ -0.58
LAMA3-201ENST00000269217 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.58
LAMA3-201ENST00000269217 ABCC4O15439 1325 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 GADD45BO75293 160 aaPredicted RBP11.45□□□□□ -0.58
LAMA3-201ENST00000269217 GCKRQ14397 625 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 MYRIPQ8NFW9 859 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 ARHGAP6O43182 974 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 SLC52A2Q9HAB3 445 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 ZBTB16Q05516 673 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 GTF3C6Q969F1 213 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 DSCC1Q9BVC3 393 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 TLDC2A0PJX2 215 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 ATP2A2P16615 1042 aaKnown RBP11.45□□□□□ -0.58
LAMA3-201ENST00000269217 TMTC1Q8IUR5 882 aa11.45□□□□□ -0.58
LAMA3-201ENST00000269217 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
LAMA3-201ENST00000269217 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 U2AF2P26368 475 aaKnown RBP eCLIP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 GTF2A1P52655 376 aaPredicted RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 DNAJC21Q5F1R6 531 aaKnown RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 HAUS3Q68CZ6 603 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 KRT40Q6A162 431 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 CERS3Q8IU89 383 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 SMC6Q96SB8 1091 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 SAMD15Q9P1V8 674 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 PABPN1LA6NDY0 278 aaKnown RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 LPIN2Q92539 896 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 LGR6Q9HBX8 967 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 ATP7AQ04656 1500 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 IBTKQ9P2D0 1353 aaPredicted RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 ATP5JP18859 108 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 OTUD7BQ6GQQ9 843 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 SPATA24Q86W54 205 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 SMAP1Q8IYB5 467 aaPredicted RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 UBLCP1Q8WVY7 318 aaPredicted RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 VEZTQ9HBM0 779 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 SMIM23A6NLE4 172 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 POSTNQ15063 836 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 C8orf74Q6P047 294 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
LAMA3-201ENST00000269217 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
LAMA3-201ENST00000269217 CCDC25Q86WR0 208 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 AFAP1L1Q8TED9 768 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 CARD6Q9BX69 1037 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 NFE2L3Q9Y4A8 694 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 ABCC2Q92887 1545 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 CCNT1O60563 726 aaKnown RBP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 TTC31Q49AM3 519 aaPredicted RBP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 CCDC114Q96M63 670 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 PLS1Q14651 629 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 JAG2Q9Y219 1238 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 CETN3O15182 167 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 CALUO43852 315 aaPredicted RBP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 KRT25Q7Z3Z0 450 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 CCDC63Q8NA47 563 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 KIFAP3Q92845 792 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 TMEM63CQ9P1W3 806 aa11.43□□□□□ -0.58
LAMA3-201ENST00000269217 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
LAMA3-201ENST00000269217 ATP5DP30049 168 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
LAMA3-201ENST00000269217 NCBP1Q09161 790 aaKnown RBP11.42□□□□□ -0.58
LAMA3-201ENST00000269217 ASIC2Q16515 512 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
LAMA3-201ENST00000269217 KCNK9Q9NPC2 374 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 SSX2IPQ9Y2D8 614 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 JAK2O60674 1132 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 TOM1O60784 492 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 TNFAIP3P21580 790 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 CEP128Q6ZU80 1094 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 SECISBP2LQ93073 1101 aaKnown RBP11.42□□□□□ -0.58
LAMA3-201ENST00000269217 NOX5Q96PH1 765 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 A6NNZ2 444 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 E7EWF7 191 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms