RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 LRRC2Q9BYS8 371 aa28.18■■■□□ 2.1
EPCAM-201ENST00000263735 MKRN1Q9UHC7 482 aaKnown RBP28.18■■■□□ 2.1
EPCAM-201ENST00000263735 F8W031 263 aaPredicted RBP28.18■■■□□ 2.1
EPCAM-201ENST00000263735 TEKT1Q969V4 418 aa28.18■■■□□ 2.1
EPCAM-201ENST00000263735 MRIQ9BWK5 157 aa28.18■■■□□ 2.1
EPCAM-201ENST00000263735 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.18■■■□□ 2.1
EPCAM-201ENST00000263735 DICER1Q9UPY3 1922 aaKnown RBP28.17■■■□□ 2.1
EPCAM-201ENST00000263735 B4E1Z4 1266 aa28.17■■■□□ 2.1
EPCAM-201ENST00000263735 USP17L12C9JPN9 530 aa28.17■■■□□ 2.1
EPCAM-201ENST00000263735 USP17L21D6R901 530 aa28.17■■■□□ 2.1
EPCAM-201ENST00000263735 IARSP41252 1262 aaKnown RBP28.17■■■□□ 2.1
EPCAM-201ENST00000263735 RHBDL3P58872 404 aa28.17■■■□□ 2.1
EPCAM-201ENST00000263735 TAOK3Q9H2K8 898 aa28.17■■■□□ 2.1
EPCAM-201ENST00000263735 ANTXR2P58335 489 aa28.16■■■□□ 2.1
EPCAM-201ENST00000263735 HDLBPQ00341 1268 aaKnown RBP28.16■■■□□ 2.1
EPCAM-201ENST00000263735 CHST3Q7LGC8 479 aa28.16■■■□□ 2.1
EPCAM-201ENST00000263735 TEX11Q8IYF3 940 aa28.15■■■□□ 2.1
EPCAM-201ENST00000263735 BCS1LQ9Y276 419 aa28.15■■■□□ 2.1
EPCAM-201ENST00000263735 MYO3BQ8WXR4 1341 aa28.15■■■□□ 2.1
EPCAM-201ENST00000263735 TGFBRAP1Q8WUH2 860 aa28.15■■■□□ 2.1
EPCAM-201ENST00000263735 MCM9Q9NXL9 1143 aa28.15■■■□□ 2.1
EPCAM-201ENST00000263735 TACC3Q9Y6A5 838 aa28.15■■■□□ 2.1
EPCAM-201ENST00000263735 GOLGB1Q14789 3259 aaKnown RBP28.14■■■□□ 2.1
EPCAM-201ENST00000263735 CYB5R4Q7L1T6 521 aa28.14■■■□□ 2.1
EPCAM-201ENST00000263735 CCDC83Q8IWF9 413 aa28.14■■■□□ 2.1
EPCAM-201ENST00000263735 AMOTL1Q8IY63 956 aa28.14■■■□□ 2.1
EPCAM-201ENST00000263735 NIM1KQ8IY84 436 aa28.14■■■□□ 2.1
EPCAM-201ENST00000263735 TMEM87BQ96K49 555 aa28.14■■■□□ 2.1
EPCAM-201ENST00000263735 LTBP3Q9NS15 1303 aa28.14■■■□□ 2.09
EPCAM-201ENST00000263735 ROBO3Q96MS0 1386 aa28.13■■■□□ 2.09
EPCAM-201ENST00000263735 SLC3A2P08195 630 aaKnown RBP28.13■■■□□ 2.09
EPCAM-201ENST00000263735 FGRP09769 529 aa28.13■■■□□ 2.09
EPCAM-201ENST00000263735 SCNN1DP51172 638 aa28.13■■■□□ 2.09
EPCAM-201ENST00000263735 EVCP57679 992 aa28.13■■■□□ 2.09
EPCAM-201ENST00000263735 KIAA0825Q8IV33 1275 aa28.13■■■□□ 2.09
EPCAM-201ENST00000263735 MTA3Q9BTC8 594 aa28.13■■■□□ 2.09
EPCAM-201ENST00000263735 CYP2D7A0A087X1C5 515 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 CRKP46108 304 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 NLGN2Q8NFZ4 835 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 INCENPQ9NQS7 918 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 KDM4AO75164 1064 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 APOBRQ0VD83 1088 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 ST3GAL1Q11201 340 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 ZNF274Q96GC6 653 aaPredicted RBP28.12■■■□□ 2.09
EPCAM-201ENST00000263735 ZDHHC15Q96MV8 337 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 TOMM22Q9NS69 142 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 ZNRF3Q9ULT6 936 aa28.12■■■□□ 2.09
EPCAM-201ENST00000263735 NFKBIEO00221 500 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 USP17L8P0C7I0 530 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 C12orf60Q5U649 245 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 ILDR2Q71H61 639 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 GTF3C6Q969F1 213 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 ZSWIM5Q9P217 1185 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 SERPINA10Q9UK55 444 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 ANGEL1Q9UNK9 670 aaKnown RBP28.11■■■□□ 2.09
EPCAM-201ENST00000263735 FLT1P17948 1338 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 SBF1O95248 1867 aa28.11■■■□□ 2.09
EPCAM-201ENST00000263735 RRP12Q5JTH9 1297 aaKnown RBP28.1■■■□□ 2.09
EPCAM-201ENST00000263735 MAPKAPK5Q8IW41 473 aa28.1■■■□□ 2.09
EPCAM-201ENST00000263735 ESR2Q92731 530 aa28.1■■■□□ 2.09
EPCAM-201ENST00000263735 VIL1P09327 827 aaKnown RBP28.09■■■□□ 2.09
EPCAM-201ENST00000263735 NT5C2P49902 561 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 NUCB2P80303 420 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 RSBN1LQ6PCB5 846 aaPredicted RBP28.09■■■□□ 2.09
EPCAM-201ENST00000263735 NECAB1Q8N987 351 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 NKX2-3Q8TAU0 364 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.09■■■□□ 2.09
EPCAM-201ENST00000263735 SH2B2O14492 632 aaPredicted RBP28.09■■■□□ 2.09
EPCAM-201ENST00000263735 ORC4O43929 436 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 PFKFB2O60825 505 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 PDE4BQ07343 736 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 SMC3Q9UQE7 1217 aa28.09■■■□□ 2.09
EPCAM-201ENST00000263735 STK3Q13188 491 aa28.08■■■□□ 2.09
EPCAM-201ENST00000263735 SART3Q15020 963 aaKnown RBP28.08■■■□□ 2.09
EPCAM-201ENST00000263735 RAB3GAP1Q15042 981 aa28.08■■■□□ 2.09
EPCAM-201ENST00000263735 APOBEC3HQ6NTF7 200 aaKnown RBP28.08■■■□□ 2.09
EPCAM-201ENST00000263735 STK11IPQ8N1F8 1099 aa28.08■■■□□ 2.09
EPCAM-201ENST00000263735 SMIM22K7EJ46 135 aa28.07■■■□□ 2.08
EPCAM-201ENST00000263735 PSMD14O00487 310 aa28.07■■■□□ 2.08
EPCAM-201ENST00000263735 CYP2D6P10635 497 aa28.07■■■□□ 2.08
EPCAM-201ENST00000263735 IGDCC4Q8TDY8 1250 aa28.07■■■□□ 2.08
EPCAM-201ENST00000263735 CHMP4CQ96CF2 233 aa28.07■■■□□ 2.08
EPCAM-201ENST00000263735 LIFRP42702 1097 aa28.06■■■□□ 2.08
EPCAM-201ENST00000263735 JDP2Q8WYK2 163 aa28.06■■■□□ 2.08
EPCAM-201ENST00000263735 GPHNQ9NQX3 736 aaPredicted RBP28.06■■■□□ 2.08
EPCAM-201ENST00000263735 USP40Q9NVE5 1235 aa28.06■■■□□ 2.08
EPCAM-201ENST00000263735 RAD17O75943 681 aa28.06■■■□□ 2.08
EPCAM-201ENST00000263735 PDIA3P30101 505 aaKnown RBP28.06■■■□□ 2.08
EPCAM-201ENST00000263735 CDC42EP5Q6NZY7 148 aa28.06■■■□□ 2.08
EPCAM-201ENST00000263735 POLR3DP05423 398 aaPredicted RBP28.05■■■□□ 2.08
EPCAM-201ENST00000263735 TMEM67Q5HYA8 995 aa28.05■■■□□ 2.08
EPCAM-201ENST00000263735 SGMS1Q86VZ5 419 aa28.05■■■□□ 2.08
EPCAM-201ENST00000263735 SIPA1L1O43166 1804 aa28.04■■■□□ 2.08
EPCAM-201ENST00000263735 KLF18A0A0U1RQI7 1052 aa28.04■■■□□ 2.08
EPCAM-201ENST00000263735 IFIT3O14879 490 aaKnown RBP28.04■■■□□ 2.08
EPCAM-201ENST00000263735 WDHD1O75717 1129 aaPredicted RBP28.04■■■□□ 2.08
EPCAM-201ENST00000263735 EVX2Q03828 476 aa28.04■■■□□ 2.08
EPCAM-201ENST00000263735 SCRN1Q12765 414 aa28.04■■■□□ 2.08
EPCAM-201ENST00000263735 GMLQ99445 158 aa28.04■■■□□ 2.08
EPCAM-201ENST00000263735 LY9Q9HBG7 655 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms