RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 PIP4K2CQ8TBX8 421 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 SIRT1Q96EB6 747 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.66□□□□□ -1.18
CNTN3-201ENST00000263665 USP19O94966 1318 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 IFT88Q13099 833 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 PAK2Q13177 524 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 RCN1Q15293 331 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 DIXDC1Q155Q3 683 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 SRGAP1Q7Z6B7 1085 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 AFAP1Q8N556 730 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 BBOF1Q8ND07 529 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 TSGA10Q9BZW7 698 aa7.66□□□□□ -1.18
CNTN3-201ENST00000263665 ZNF644Q9H582 1327 aaPredicted RBP7.65□□□□□ -1.18
CNTN3-201ENST00000263665 CHMP2AO43633 222 aa7.65□□□□□ -1.18
CNTN3-201ENST00000263665 EXOSC9Q06265 439 aaKnown RBP7.65□□□□□ -1.18
CNTN3-201ENST00000263665 CACTINQ8WUQ7 758 aaKnown RBP7.65□□□□□ -1.18
CNTN3-201ENST00000263665 CYLC1P35663 651 aaPredicted RBP7.65□□□□□ -1.18
CNTN3-201ENST00000263665 NDUFA5Q16718 116 aa7.65□□□□□ -1.18
CNTN3-201ENST00000263665 ARL10Q8N8L6 244 aa7.65□□□□□ -1.18
CNTN3-201ENST00000263665 NAP1L4Q99733 375 aaKnown RBP7.65□□□□□ -1.18
CNTN3-201ENST00000263665 C10orf88Q9H8K7 445 aa7.65□□□□□ -1.18
CNTN3-201ENST00000263665 PCDHB15Q9Y5E8 787 aa7.65□□□□□ -1.18
CNTN3-201ENST00000263665 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.65□□□□□ -1.18
CNTN3-201ENST00000263665 CFTRP13569 1480 aa7.65□□□□□ -1.18
CNTN3-201ENST00000263665 E7ENQ6 273 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 P4HA2O15460 535 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 KRT86O43790 486 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 ESRRBO95718 433 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 SMTNP53814 917 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 CEBPZQ03701 1054 aaKnown RBP7.65□□□□□ -1.19
CNTN3-201ENST00000263665 PSME1Q06323 249 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 ALS2CLQ60I27 953 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 LEO1Q8WVC0 666 aaPredicted RBP7.65□□□□□ -1.19
CNTN3-201ENST00000263665 NR1H4Q96RI1 486 aaPredicted RBP7.65□□□□□ -1.19
CNTN3-201ENST00000263665 BHMT2Q9H2M3 363 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 RANBP17Q9H2T7 1088 aaKnown RBP7.65□□□□□ -1.19
CNTN3-201ENST00000263665 VIPAS39Q9H9C1 493 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 PFDN4Q9NQP4 134 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.19
CNTN3-201ENST00000263665 HNRNPMP52272 730 aaKnown RBP eCLIP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 MYO1EQ12965 1108 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 SKAP1Q86WV1 359 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TEKT4Q8WW24 435 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 MAIP1Q8WWC4 291 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 METTL14Q9HCE5 456 aaKnown RBP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 PDP2Q9P2J9 529 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 RRP7AQ9Y3A4 280 aaKnown RBP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 ZNF711Q9Y462 761 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 VDRP11473 427 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 GNAT1P11488 350 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TNNC1P63316 161 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 LMNB2Q03252 620 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 DMPKQ09013 629 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 CATSPER2Q96P56 530 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 CLSTN2Q9H4D0 955 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 ATAD2BQ9ULI0 1458 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 RAB11FIP3O75154 756 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 RPS6KA5O75582 802 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 SEC31AO94979 1220 aaKnown RBP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TRPC3Q13507 836 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 ZNF569Q5MCW4 686 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TMEM57Q8N5G2 664 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TSG101Q99816 390 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 ZFATQ9P243 1243 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 COL17A1Q9UMD9 1497 aaPredicted RBP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 MAP3K7O43318 606 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 SLC3A2P08195 630 aaKnown RBP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 FAM200BP0CF97 657 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 MYBL2P10244 700 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 GPTP24298 496 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 CCND1P24385 295 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 GCLCP48506 637 aaPredicted RBP7.64□□□□□ -1.19
CNTN3-201ENST00000263665 DDR1Q08345 913 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 BTN2A1Q7KYR7 527 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 CCDC144CPQ8IYA2 1237 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 SELENOSQ9BQE4 189 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 LZTS2Q9BRK4 669 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 USP26Q9BXU7 913 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 DNAJC25Q9H1X3 360 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 IL1RAPL1Q9NZN1 696 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TBC1D2BQ9UPU7 963 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 TACC3Q9Y6A5 838 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 CARMIL2Q6F5E8 1435 aa7.64□□□□□ -1.19
CNTN3-201ENST00000263665 PDS5BQ9NTI5 1447 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 MCF2LO15068 1137 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 HSPA9P38646 679 aaKnown RBP7.63□□□□□ -1.19
CNTN3-201ENST00000263665 KLC1Q07866 573 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 ACTN3Q08043 901 aaPredicted RBP7.63□□□□□ -1.19
CNTN3-201ENST00000263665 NBPF15Q8N660 670 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 SAMD3Q8N6K7 520 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 CNOT10Q9H9A5 744 aaKnown RBP7.63□□□□□ -1.19
CNTN3-201ENST00000263665 TXLNGQ9NUQ3 528 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 BCAP29Q9UHQ4 241 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 CUL7Q14999 1698 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 GNAI2P04899 355 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 CTCFP49711 727 aaPredicted RBP7.63□□□□□ -1.19
CNTN3-201ENST00000263665 MYBPC2Q14324 1141 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 TCERG1LQ5VWI1 586 aa7.63□□□□□ -1.19
CNTN3-201ENST00000263665 FBXW10Q5XX13 1052 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms