RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 USP5P45974 858 aa27.04■■□□□ 1.92
SMARCB1-201ENST00000263121 FGD1P98174 961 aa27.04■■□□□ 1.92
SMARCB1-201ENST00000263121 HHIPL2Q6UWX4 724 aa27.04■■□□□ 1.92
SMARCB1-201ENST00000263121 CYB5R4Q7L1T6 521 aa27.04■■□□□ 1.92
SMARCB1-201ENST00000263121 LARGE2Q8N3Y3 721 aa27.04■■□□□ 1.92
SMARCB1-201ENST00000263121 KRT23Q9C075 422 aa27.04■■□□□ 1.92
SMARCB1-201ENST00000263121 DDX60LQ5H9U9 1706 aaKnown RBP27.03■■□□□ 1.92
SMARCB1-201ENST00000263121 ADAMTSL1Q8N6G6 1762 aa27.03■■□□□ 1.92
SMARCB1-201ENST00000263121 CYP2D7A0A087X1C5 515 aa27.03■■□□□ 1.92
SMARCB1-201ENST00000263121 MRIQ9BWK5 157 aa27.03■■□□□ 1.92
SMARCB1-201ENST00000263121 FOCADQ5VW36 1801 aa27.03■■□□□ 1.92
SMARCB1-201ENST00000263121 SMIM22K7EJ46 135 aa27.02■■□□□ 1.92
SMARCB1-201ENST00000263121 FGRP09769 529 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 PCP11498 1178 aaKnown RBP27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 IARSP41252 1262 aaKnown RBP27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 EVCP57679 992 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 ILDR2Q71H61 639 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 CCDC83Q8IWF9 413 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 TEX11Q8IYF3 940 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 NLGN2Q8NFZ4 835 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 TGFBRAP1Q8WUH2 860 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 TEKT1Q969V4 418 aa27.01■■□□□ 1.92
SMARCB1-201ENST00000263121 SCNN1DP51172 638 aa27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 HDLBPQ00341 1268 aaKnown RBP27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 NECAB1Q8N987 351 aa27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 TAOK3Q9H2K8 898 aa27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 MCM9Q9NXL9 1143 aa27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 BCS1LQ9Y276 419 aa27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.01■■□□□ 1.91
SMARCB1-201ENST00000263121 ARFGEF1Q9Y6D6 1849 aa27■■□□□ 1.91
SMARCB1-201ENST00000263121 APOBRQ0VD83 1088 aa27■■□□□ 1.91
SMARCB1-201ENST00000263121 KIAA0825Q8IV33 1275 aa27■■□□□ 1.91
SMARCB1-201ENST00000263121 GPHNQ9NQX3 736 aaPredicted RBP27■■□□□ 1.91
SMARCB1-201ENST00000263121 NFKBIEO00221 500 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 KDM4AO75164 1064 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 USP17L8P0C7I0 530 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 CYP2D6P10635 497 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 CRKP46108 304 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 TMEM87BQ96K49 555 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 ZSWIM5Q9P217 1185 aa26.99■■□□□ 1.91
SMARCB1-201ENST00000263121 EVX2Q03828 476 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 C12orf60Q5U649 245 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 GTF3C6Q969F1 213 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 ZDHHC15Q96MV8 337 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 ROBO3Q96MS0 1386 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 FLT1P17948 1338 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 LTBP3Q9NS15 1303 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 SH2B2O14492 632 aaPredicted RBP26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 APOBEC3HQ6NTF7 200 aaKnown RBP26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 MAPKAPK5Q8IW41 473 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 NIM1KQ8IY84 436 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 ZNF274Q96GC6 653 aaPredicted RBP26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 ZNRF3Q9ULT6 936 aa26.98■■□□□ 1.91
SMARCB1-201ENST00000263121 MYO3BQ8WXR4 1341 aa26.97■■□□□ 1.91
SMARCB1-201ENST00000263121 PFKFB2O60825 505 aa26.97■■□□□ 1.91
SMARCB1-201ENST00000263121 RAB3GAP1Q15042 981 aa26.97■■□□□ 1.91
SMARCB1-201ENST00000263121 STK11IPQ8N1F8 1099 aa26.97■■□□□ 1.91
SMARCB1-201ENST00000263121 MTA3Q9BTC8 594 aa26.97■■□□□ 1.91
SMARCB1-201ENST00000263121 ANGEL1Q9UNK9 670 aaKnown RBP26.97■■□□□ 1.91
SMARCB1-201ENST00000263121 VIL1P09327 827 aaKnown RBP26.96■■□□□ 1.91
SMARCB1-201ENST00000263121 STK3Q13188 491 aa26.96■■□□□ 1.91
SMARCB1-201ENST00000263121 RRP12Q5JTH9 1297 aaKnown RBP26.96■■□□□ 1.91
SMARCB1-201ENST00000263121 IGDCC4Q8TDY8 1250 aa26.96■■□□□ 1.91
SMARCB1-201ENST00000263121 TOMM22Q9NS69 142 aa26.96■■□□□ 1.91
SMARCB1-201ENST00000263121 SERPINA10Q9UK55 444 aa26.96■■□□□ 1.91
SMARCB1-201ENST00000263121 ORC4O43929 436 aa26.95■■□□□ 1.91
SMARCB1-201ENST00000263121 SLC3A2P08195 630 aaKnown RBP26.95■■□□□ 1.91
SMARCB1-201ENST00000263121 RSBN1LQ6PCB5 846 aaPredicted RBP26.95■■□□□ 1.91
SMARCB1-201ENST00000263121 ESR2Q92731 530 aa26.95■■□□□ 1.91
SMARCB1-201ENST00000263121 ECM29Q5VYK3 1845 aa26.95■■□□□ 1.91
SMARCB1-201ENST00000263121 PSMD14O00487 310 aa26.95■■□□□ 1.9
SMARCB1-201ENST00000263121 PDIA3P30101 505 aaKnown RBP26.95■■□□□ 1.9
SMARCB1-201ENST00000263121 NUCB2P80303 420 aa26.95■■□□□ 1.9
SMARCB1-201ENST00000263121 AMOTL1Q8IY63 956 aa26.95■■□□□ 1.9
SMARCB1-201ENST00000263121 BRPF3Q9ULD4 1205 aa26.95■■□□□ 1.9
SMARCB1-201ENST00000263121 SMC3Q9UQE7 1217 aa26.95■■□□□ 1.9
SMARCB1-201ENST00000263121 RAD17O75943 681 aa26.94■■□□□ 1.9
SMARCB1-201ENST00000263121 CDC42EP5Q6NZY7 148 aa26.94■■□□□ 1.9
SMARCB1-201ENST00000263121 GMLQ99445 158 aa26.94■■□□□ 1.9
SMARCB1-201ENST00000263121 USP40Q9NVE5 1235 aa26.94■■□□□ 1.9
SMARCB1-201ENST00000263121 MYH1P12882 1939 aa26.93■■□□□ 1.9
SMARCB1-201ENST00000263121 GOLGB1Q14789 3259 aaKnown RBP26.93■■□□□ 1.9
SMARCB1-201ENST00000263121 WDHD1O75717 1129 aaPredicted RBP26.93■■□□□ 1.9
SMARCB1-201ENST00000263121 SCRN1Q12765 414 aa26.93■■□□□ 1.9
SMARCB1-201ENST00000263121 LY9Q9HBG7 655 aa26.93■■□□□ 1.9
SMARCB1-201ENST00000263121 LIFRP42702 1097 aa26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 TMEM67Q5HYA8 995 aa26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 SGMS1Q86VZ5 419 aa26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 SAP30BPQ9UHR5 308 aaKnown RBP26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 KLF18A0A0U1RQI7 1052 aa26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 IFIT3O14879 490 aaKnown RBP26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 PDE4BQ07343 736 aa26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 PKP1Q13835 747 aa26.92■■□□□ 1.9
SMARCB1-201ENST00000263121 PRDM1O75626 825 aa26.91■■□□□ 1.9
SMARCB1-201ENST00000263121 POLR3DP05423 398 aaPredicted RBP26.91■■□□□ 1.9
SMARCB1-201ENST00000263121 NT5C2P49902 561 aa26.91■■□□□ 1.9
SMARCB1-201ENST00000263121 PLCD1P51178 756 aa26.91■■□□□ 1.9
SMARCB1-201ENST00000263121 PCDHAC2Q9Y5I4 1007 aa26.91■■□□□ 1.9
SMARCB1-201ENST00000263121 GJB2P29033 226 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms