RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 DLG5Q8TDM6 1919 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 BLMP54132 1417 aaPredicted RBP9.5□□□□□ -0.89
LDB3-201ENST00000263066 ATP7BP35670 1465 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 TAF5LO75529 589 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 F13A1P00488 732 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 SNX1Q13596 522 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 CCDC150Q8NCX0 1101 aa9.5□□□□□ -0.89
LDB3-201ENST00000263066 EIF4E1BA6NMX2 242 aaKnown RBP9.49□□□□□ -0.89
LDB3-201ENST00000263066 MYO1FO00160 1098 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
LDB3-201ENST00000263066 NEFHP12036 1026 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 CHMP4BP1P59074 171 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 CCDC121Q6ZUS5 278 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 FAM210AQ96ND0 272 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 TRIM4Q9C037 500 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 CCDC189A1A4V9 331 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 POTEB2H3BUK9 544 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 SNAP23O00161 211 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 BIN1O00499 593 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
LDB3-201ENST00000263066 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 SDSP20132 328 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 GSCP56915 257 aaPredicted RBP9.49□□□□□ -0.89
LDB3-201ENST00000263066 PPP1R13BQ96KQ4 1090 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 ZSCAN16Q9H4T2 348 aaPredicted RBP9.49□□□□□ -0.89
LDB3-201ENST00000263066 TMEM165Q9HC07 324 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 RIPOR2Q9Y4F9 1068 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 TBC1D8O95759 1140 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 CAVIN2O95810 425 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 LRRC23Q53EV4 343 aaPredicted RBP9.49□□□□□ -0.89
LDB3-201ENST00000263066 B4GALNT4Q76KP1 1039 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 ARMC9Q7Z3E5 817 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 DLC1Q96QB1 1528 aa9.49□□□□□ -0.89
LDB3-201ENST00000263066 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 GOLGA6CA6NDK9 693 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 SMIM24O75264 130 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 SNUPNO95149 360 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 GOLGA6DP0CG33 693 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 DDX46Q7L014 1031 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 MRPL50Q8N5N7 158 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 TACO1Q9BSH4 297 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 CHCHD3Q9NX63 227 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 GOLGA6AQ9NYA3 693 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 IFNKQ9P0W0 207 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 N4BP1O75113 896 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 RNF40O75150 1001 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 SNCBQ16143 134 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 TTC39AQ5SRH9 613 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 KSR2Q6VAB6 950 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 PARD3BQ8TEW8 1205 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 DDX21Q9NR30 783 aaKnown RBP eCLIP9.48□□□□□ -0.89
LDB3-201ENST00000263066 ANO10Q9NW15 660 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 BCS1LQ9Y276 419 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 GJB2P29033 226 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 CCNHP51946 323 aaPredicted RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 GNGT1P63211 74 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 TRIM74Q86UV6 250 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 TRIM73Q86UV7 250 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 ZSCAN29Q8IWY8 852 aaPredicted RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 PRDM16Q9HAZ2 1276 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 TPX2Q9ULW0 747 aaKnown RBP9.48□□□□□ -0.89
LDB3-201ENST00000263066 AK9Q5TCS8 1911 aa9.48□□□□□ -0.89
LDB3-201ENST00000263066 TECPR2O15040 1411 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 MST1RQ04912 1400 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 MYBL2P10244 700 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 TIMM10P62072 90 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 STK3Q13188 491 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 FAM71BQ8TC56 605 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 TEX13AQ9BXU3 409 aaPredicted RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 MAP2P11137 1827 aaKnown RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 USP54Q70EL1 1684 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 H3BQF6 201 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 GRM8O00222 908 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 KIF5CO60282 957 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 SASH3O75995 380 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 TOP1P11387 765 aaKnown RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 ARHGAP25P42331 645 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 CRYMQ14894 314 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 BRD3Q15059 726 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 STX1AQ16623 288 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 TPTE2Q6XPS3 522 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 LZTFL1Q9NQ48 299 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 PSD3Q9NYI0 1048 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 LRP2BPQ9P2M1 347 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 HOOK1Q9UJC3 728 aaKnown RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 ADGRB2O60241 1585 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms