RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 TMEM87BQ96K49 555 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 SCN9AQ15858 1988 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
VAMP7-201ENST00000262640 EVCP57679 992 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 NUCB2P80303 420 aa15.34■□□□□ 0.05
VAMP7-201ENST00000262640 ZNF646O15015 1829 aaPredicted RBP15.33■□□□□ 0.04
VAMP7-201ENST00000262640 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 KDM4AO75164 1064 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 FGRP09769 529 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 SCNN1DP51172 638 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 APOBRQ0VD83 1088 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 NIM1KQ8IY84 436 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 NECAB1Q8N987 351 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 ZNF274Q96GC6 653 aaPredicted RBP15.33■□□□□ 0.04
VAMP7-201ENST00000262640 MTA3Q9BTC8 594 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 INCENPQ9NQS7 918 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 TOMM22Q9NS69 142 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 BCS1LQ9Y276 419 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 MYO3BQ8WXR4 1341 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 CRKP46108 304 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 ST3GAL1Q11201 340 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 KIAA0825Q8IV33 1275 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 ESR2Q92731 530 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 GTF3C6Q969F1 213 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 CHMP4CQ96CF2 233 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 SMC3Q9UQE7 1217 aa15.33■□□□□ 0.04
VAMP7-201ENST00000262640 SH2B2O14492 632 aaPredicted RBP15.32■□□□□ 0.04
VAMP7-201ENST00000262640 PFKFB2O60825 505 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 RAB3GAP1Q15042 981 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 RRP12Q5JTH9 1297 aaKnown RBP15.32■□□□□ 0.04
VAMP7-201ENST00000262640 C12orf60Q5U649 245 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 MAPKAPK5Q8IW41 473 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 ZDHHC15Q96MV8 337 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 ZSWIM5Q9P217 1185 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 ZNRF3Q9ULT6 936 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 ANGEL1Q9UNK9 670 aaKnown RBP15.32■□□□□ 0.04
VAMP7-201ENST00000262640 LAMB1P07942 1786 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
VAMP7-201ENST00000262640 ORC4O43929 436 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 USP17L8P0C7I0 530 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 NT5C2P49902 561 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 STK3Q13188 491 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
VAMP7-201ENST00000262640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
VAMP7-201ENST00000262640 FLT1P17948 1338 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 LTBP3Q9NS15 1303 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 CYP2D6P10635 497 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 SART3Q15020 963 aaKnown RBP15.31■□□□□ 0.04
VAMP7-201ENST00000262640 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 NLGN2Q8NFZ4 835 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 ROBO3Q96MS0 1386 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 COL4A5P29400 1685 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 FER1L6Q2WGJ9 1857 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 NAV1Q8NEY1 1877 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 NFKBIEO00221 500 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
VAMP7-201ENST00000262640 PDIA3P30101 505 aaKnown RBP15.31■□□□□ 0.04
VAMP7-201ENST00000262640 PDE4BQ07343 736 aa15.31■□□□□ 0.04
VAMP7-201ENST00000262640 APOBEC3HQ6NTF7 200 aaKnown RBP15.31■□□□□ 0.04
VAMP7-201ENST00000262640 RSBN1LQ6PCB5 846 aaPredicted RBP15.31■□□□□ 0.04
VAMP7-201ENST00000262640 GPHNQ9NQX3 736 aaPredicted RBP15.31■□□□□ 0.04
VAMP7-201ENST00000262640 PSME4Q14997 1843 aa15.3■□□□□ 0.04
VAMP7-201ENST00000262640 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
VAMP7-201ENST00000262640 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
VAMP7-201ENST00000262640 IGDCC4Q8TDY8 1250 aa15.3■□□□□ 0.04
VAMP7-201ENST00000262640 USP40Q9NVE5 1235 aa15.3■□□□□ 0.04
VAMP7-201ENST00000262640 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 SMIM22K7EJ46 135 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 PSMD14O00487 310 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
VAMP7-201ENST00000262640 LIFRP42702 1097 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 ERICH2A1L162 156 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 RAD17O75943 681 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 SGMS1Q86VZ5 419 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 JDP2Q8WYK2 163 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 LLPHQ9BRT6 129 aaKnown RBP15.29■□□□□ 0.04
VAMP7-201ENST00000262640 LY9Q9HBG7 655 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
VAMP7-201ENST00000262640 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
VAMP7-201ENST00000262640 NAP1L2Q9ULW6 460 aaPredicted RBP15.29■□□□□ 0.04
VAMP7-201ENST00000262640 GJB2P29033 226 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 SCRN1Q12765 414 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 DDX60LQ5H9U9 1706 aaKnown RBP15.28■□□□□ 0.04
VAMP7-201ENST00000262640 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 GOLGA8BA8MQT2 603 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 RANBP6O60518 1105 aaKnown RBP15.28■□□□□ 0.04
VAMP7-201ENST00000262640 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
VAMP7-201ENST00000262640 RBM5P52756 815 aaKnown RBP eCLIP15.28■□□□□ 0.04
VAMP7-201ENST00000262640 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
VAMP7-201ENST00000262640 GMLQ99445 158 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms