RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 MCTP2Q6DN12 878 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 DPH6Q7L8W6 267 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 PPP1R9AQ9ULJ8 1098 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 KRT23Q9C075 422 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 VCX3AQ9NNX9 186 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 KLHL14Q9P2G3 628 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 IL16Q14005 1332 aa11.99□□□□□ -0.49
SLC6A4-201ENST00000261707 CFAP221Q4G0U5 840 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 ABT1Q9ULW3 272 aaKnown RBP11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 MTX1Q13505 466 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 MCMDC2Q4G0Z9 681 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 USP37Q86T82 979 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 SIRT1Q96EB6 747 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 RPGRIP1Q96KN7 1286 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 FAM204AQ9H8W3 233 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 ANKRD36BQ8N2N9 1353 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 APOBRQ0VD83 1088 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 NMIQ13287 307 aaPredicted RBP11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 INF2Q27J81 1249 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 Q9H521 79 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 I3L4J1 428 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 BAG2O95816 211 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 ANKRD20A3Q5VUR7 823 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 EYA3Q99504 573 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 EHBP1L1Q8N3D4 1523 aa11.98□□□□□ -0.49
SLC6A4-201ENST00000261707 TSPY2A6NKD2 308 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 CTNNA1P35221 906 aaKnown RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 RAPGEF1Q13905 1077 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 TTC19Q6DKK2 380 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 ATP8B1O43520 1251 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 KRT2P35908 639 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 ZKSCAN8Q15776 578 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 CCDC152Q4G0S7 254 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 SYNRGQ9UMZ2 1314 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 M0QZ92 97 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 GUCY2FP51841 1108 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 CCDC14Q49A88 953 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 CCDC65Q8IXS2 484 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 ANKRD42Q8N9B4 389 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 NACA2Q9H009 215 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 TACC3Q9Y6A5 838 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 SEC31AO94979 1220 aaKnown RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 LEO1Q8WVC0 666 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 ZC3H12CQ9C0D7 883 aaKnown RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 CSRNP2Q9H175 543 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 MAP3K2Q9Y2U5 619 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 STX2P32856 288 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 PDE4BQ07343 736 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 TMED1Q13445 227 aa11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
SLC6A4-201ENST00000261707 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 ICE2Q659A1 982 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 TMTC2Q8N394 836 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 PSMB7Q99436 277 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 THEGQ9P2T0 379 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 HSP90AA5PQ58FG0 334 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 MAP3K21Q5TCX8 1036 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 NYXQ9GZU5 481 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 XAB2Q9HCS7 855 aaKnown RBP11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 BCAP29Q9UHQ4 241 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 MRFAP1Q9Y605 127 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 RGS16O15492 202 aaPredicted RBP11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 CEP104O60308 925 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 POLE2P56282 527 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 SAR1BQ9Y6B6 198 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 NCAPD3P42695 1498 aa11.96□□□□□ -0.49
SLC6A4-201ENST00000261707 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 ZNF804AQ7Z570 1209 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 MEIS3Q99687 375 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 NUP58Q9BVL2 599 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 TROVE2P10155 538 aaKnown RBP eCLIP11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 OTUD7BQ6GQQ9 843 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 IQUBQ8NA54 791 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 CNNM2Q9H8M5 875 aa11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.96□□□□□ -0.5
SLC6A4-201ENST00000261707 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
SLC6A4-201ENST00000261707 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
SLC6A4-201ENST00000261707 SPECC1L-ADORA2AF8WAN1 911 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms