RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 RGS3P49796 1198 aa11.38□□□□□ -0.59
LIN7A-201ENST00000261203 MECOMQ03112 1051 aa11.38□□□□□ -0.59
LIN7A-201ENST00000261203 PPATQ06203 517 aa11.38□□□□□ -0.59
LIN7A-201ENST00000261203 TAF1CQ15572 869 aaPredicted RBP11.38□□□□□ -0.59
LIN7A-201ENST00000261203 ZFYVE28Q9HCC9 887 aa11.38□□□□□ -0.59
LIN7A-201ENST00000261203 ZNF112Q9UJU3 913 aa11.38□□□□□ -0.59
LIN7A-201ENST00000261203 RFX7Q2KHR2 1363 aa11.38□□□□□ -0.59
LIN7A-201ENST00000261203 GPR75-ASB3A0A0A6YYF3 556 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 IRF6O14896 467 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 SURF6O75683 361 aaKnown RBP11.37□□□□□ -0.59
LIN7A-201ENST00000261203 INPP5BP32019 993 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 BTDP43251 543 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 SP3Q02447 781 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 CCDC158Q5M9N0 1113 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
LIN7A-201ENST00000261203 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
LIN7A-201ENST00000261203 TRIM17Q9Y577 477 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 DOCK1Q14185 1865 aa11.37□□□□□ -0.59
LIN7A-201ENST00000261203 MYO5AQ9Y4I1 1855 aaKnown RBP11.36□□□□□ -0.59
LIN7A-201ENST00000261203 IGSF3O75054 1194 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 MCAMP43121 646 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
LIN7A-201ENST00000261203 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 PI16Q6UXB8 463 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 OTOP1Q7RTM1 612 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 ZSCAN29Q8IWY8 852 aaPredicted RBP11.36□□□□□ -0.59
LIN7A-201ENST00000261203 ZFPM1Q8IX07 1006 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 FAM43AQ8N2R8 423 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 NSUN4Q96CB9 384 aaKnown RBP11.36□□□□□ -0.59
LIN7A-201ENST00000261203 ZNF512BQ96KM6 892 aaPredicted RBP11.36□□□□□ -0.59
LIN7A-201ENST00000261203 RAI14Q9P0K7 980 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 LRP2BPQ9P2M1 347 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 PTPRFP10586 1907 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
LIN7A-201ENST00000261203 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 RHBDL3P58872 404 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 TBC1D9Q6ZT07 1266 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.35□□□□□ -0.59
LIN7A-201ENST00000261203 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
LIN7A-201ENST00000261203 EFCC1Q9HA90 598 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 KCNH4Q9UQ05 1017 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 COL2A1P02458 1487 aaPredicted RBP11.35□□□□□ -0.59
LIN7A-201ENST00000261203 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
LIN7A-201ENST00000261203 RBBP6Q7Z6E9 1792 aaKnown RBP11.34□□□□□ -0.59
LIN7A-201ENST00000261203 PHF20L1A8MW92 1017 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 BTBD19C9JJ37 291 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 TLR2O60603 784 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 PLCG2P16885 1265 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 PICALMQ13492 652 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 ANKRD23Q86SG2 305 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 PANK1Q8TE04 598 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 DBNDD2Q9BQY9 259 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
LIN7A-201ENST00000261203 PICK1Q9NRD5 415 aa11.34□□□□□ -0.59
LIN7A-201ENST00000261203 HTTP42858 3142 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 MKI67P46013 3256 aaKnown RBP11.33□□□□□ -0.6
LIN7A-201ENST00000261203 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
LIN7A-201ENST00000261203 CXCL11O14625 94 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 TBC1D12O60347 775 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
LIN7A-201ENST00000261203 BAG3O95817 575 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 KIF22Q14807 665 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
LIN7A-201ENST00000261203 SH3BP5LQ7L8J4 393 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 CHMP4BQ9H444 224 aaKnown RBP11.33□□□□□ -0.6
LIN7A-201ENST00000261203 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
LIN7A-201ENST00000261203 GNRH1P01148 92 aa11.32□□□□□ -0.6
LIN7A-201ENST00000261203 PTPRAP18433 802 aa11.32□□□□□ -0.6
LIN7A-201ENST00000261203 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
LIN7A-201ENST00000261203 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
LIN7A-201ENST00000261203 DBNLQ9UJU6 430 aaKnown RBP11.32□□□□□ -0.6
LIN7A-201ENST00000261203 DDX19BQ9UMR2 479 aa11.32□□□□□ -0.6
LIN7A-201ENST00000261203 MGAMO43451 1857 aa11.32□□□□□ -0.6
LIN7A-201ENST00000261203 PDHXO00330 501 aa11.31□□□□□ -0.6
LIN7A-201ENST00000261203 HMMRO75330 724 aa11.31□□□□□ -0.6
LIN7A-201ENST00000261203 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 PPP4CP60510 307 aa11.31□□□□□ -0.6
LIN7A-201ENST00000261203 TMED8Q6PL24 325 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
LIN7A-201ENST00000261203 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 CCDC8Q9H0W5 538 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 OSBPL5Q9H0X9 879 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
LIN7A-201ENST00000261203 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms