RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 PDRG1Q9NUG6 133 aa21.07■□□□□ 0.96
CCDC115-201ENST00000259229 FLT1P17948 1338 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 USP17L12C9JPN9 530 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 USP17L21D6R901 530 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 CIAPIN1Q6FI81 312 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 STAG1Q8WVM7 1258 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 INCENPQ9NQS7 918 aa21.06■□□□□ 0.96
CCDC115-201ENST00000259229 WDHD1O75717 1129 aaPredicted RBP21.05■□□□□ 0.96
CCDC115-201ENST00000259229 USP17L8P0C7I0 530 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 CYP2D6P10635 497 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 USP5P45974 858 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 ANTXR2P58335 489 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 TOB2Q14106 344 aaPredicted RBP21.05■□□□□ 0.96
CCDC115-201ENST00000259229 AKNAD1Q5T1N1 836 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 CDC42EP5Q6NZY7 148 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 AGBL3Q8NEM8 1001 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 ARPP21Q9UBL0 812 aaPredicted RBP21.05■□□□□ 0.96
CCDC115-201ENST00000259229 ROBO3Q96MS0 1386 aa21.05■□□□□ 0.96
CCDC115-201ENST00000259229 SIPA1L1O43166 1804 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 HMGB1P09429 215 aaKnown RBP21.04■□□□□ 0.96
CCDC115-201ENST00000259229 MCM2P49736 904 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 ARHGAP27Q6ZUM4 889 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 DHX32Q7L7V1 743 aaKnown RBP21.04■□□□□ 0.96
CCDC115-201ENST00000259229 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 DDX4Q9NQI0 724 aaKnown RBP21.04■□□□□ 0.96
CCDC115-201ENST00000259229 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 NCOA7Q8NI08 942 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 AGXT2Q9BYV1 514 aa21.04■□□□□ 0.96
CCDC115-201ENST00000259229 FGRP09769 529 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 CFAP100Q494V2 611 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 C12orf60Q5U649 245 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 NOL8Q76FK4 1167 aaKnown RBP21.03■□□□□ 0.96
CCDC115-201ENST00000259229 TMX3Q96JJ7 454 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 USP40Q9NVE5 1235 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 MCM9Q9NXL9 1143 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 ZNF541Q9H0D2 1346 aa21.03■□□□□ 0.96
CCDC115-201ENST00000259229 LMNB1P20700 586 aa21.02■□□□□ 0.96
CCDC115-201ENST00000259229 CYB5R4Q7L1T6 521 aa21.02■□□□□ 0.96
CCDC115-201ENST00000259229 LARP6Q9BRS8 491 aaKnown RBP21.02■□□□□ 0.96
CCDC115-201ENST00000259229 LRRC2Q9BYS8 371 aa21.02■□□□□ 0.96
CCDC115-201ENST00000259229 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.02■□□□□ 0.96
CCDC115-201ENST00000259229 UTRNP46939 3433 aa21.02■□□□□ 0.95
CCDC115-201ENST00000259229 B4E1Z4 1266 aa21.01■□□□□ 0.95
CCDC115-201ENST00000259229 LARGE1O95461 756 aa21.01■□□□□ 0.95
CCDC115-201ENST00000259229 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
CCDC115-201ENST00000259229 FBXL16Q8N461 479 aa21.01■□□□□ 0.95
CCDC115-201ENST00000259229 WDR19Q8NEZ3 1342 aa21.01■□□□□ 0.95
CCDC115-201ENST00000259229 NFIAQ12857 509 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 TNIP1Q15025 636 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 Q6ZUG5 572 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 RALYLQ86SE5 291 aaKnown RBP21■□□□□ 0.95
CCDC115-201ENST00000259229 PRMT6Q96LA8 375 aaPredicted RBP21■□□□□ 0.95
CCDC115-201ENST00000259229 SHTN1A0MZ66 631 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 SPDYE2BA6NHP3 402 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 SPDYE6P0CI01 402 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 PLCD1P51178 756 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 CUL4AQ13619 759 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 SLC4A8Q2Y0W8 1093 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 MFSD6Q6ZSS7 791 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 ZBED3Q96IU2 234 aaPredicted RBP21■□□□□ 0.95
CCDC115-201ENST00000259229 SAP30BPQ9UHR5 308 aaKnown RBP21■□□□□ 0.95
CCDC115-201ENST00000259229 TPCN1Q9ULQ1 816 aa21■□□□□ 0.95
CCDC115-201ENST00000259229 PRC1O43663 620 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 MCM5P33992 734 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 RBM5P52756 815 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCDC115-201ENST00000259229 ST3GAL1Q11201 340 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 STK11IPQ8N1F8 1099 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 MTMR14Q8NCE2 650 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 IDI2Q9BXS1 227 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 OSBPL5Q9H0X9 879 aaPredicted RBP20.99■□□□□ 0.95
CCDC115-201ENST00000259229 RNF41Q9H4P4 317 aaPredicted RBP20.99■□□□□ 0.95
CCDC115-201ENST00000259229 CNNM2Q9H8M5 875 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 GPHNQ9NQX3 736 aaPredicted RBP20.99■□□□□ 0.95
CCDC115-201ENST00000259229 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
CCDC115-201ENST00000259229 HDAC9Q9UKV0 1011 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 LIMCH1Q9UPQ0 1083 aa20.99■□□□□ 0.95
CCDC115-201ENST00000259229 RPS12P25398 132 aaKnown RBP20.98■□□□□ 0.95
CCDC115-201ENST00000259229 CACNB3P54284 484 aa20.98■□□□□ 0.95
CCDC115-201ENST00000259229 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
CCDC115-201ENST00000259229 ZNF280AP59817 542 aaPredicted RBP20.98■□□□□ 0.95
CCDC115-201ENST00000259229 TRDNQ13061 729 aa20.98■□□□□ 0.95
CCDC115-201ENST00000259229 PICALMQ13492 652 aa20.98■□□□□ 0.95
CCDC115-201ENST00000259229 KRT23Q9C075 422 aa20.98■□□□□ 0.95
CCDC115-201ENST00000259229 FAM198AQ9UFP1 575 aa20.98■□□□□ 0.95
CCDC115-201ENST00000259229 KDM4AO75164 1064 aa20.97■□□□□ 0.95
CCDC115-201ENST00000259229 PCP11498 1178 aaKnown RBP20.97■□□□□ 0.95
CCDC115-201ENST00000259229 ANKRD1Q15327 319 aa20.97■□□□□ 0.95
CCDC115-201ENST00000259229 SPRYD3Q8NCJ5 442 aa20.97■□□□□ 0.95
CCDC115-201ENST00000259229 TDRD3Q9H7E2 651 aaKnown RBP20.97■□□□□ 0.95
CCDC115-201ENST00000259229 ZSWIM5Q9P217 1185 aa20.97■□□□□ 0.95
CCDC115-201ENST00000259229 ORC4O43929 436 aa20.96■□□□□ 0.95
CCDC115-201ENST00000259229 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
CCDC115-201ENST00000259229 DDIT3P35638 169 aa20.96■□□□□ 0.95
CCDC115-201ENST00000259229 GMPSP49915 693 aaPredicted RBP20.96■□□□□ 0.95
CCDC115-201ENST00000259229 ME3Q16798 604 aa20.96■□□□□ 0.95
CCDC115-201ENST00000259229 ZFPM1Q8IX07 1006 aa20.96■□□□□ 0.95
CCDC115-201ENST00000259229 OGFOD1Q8N543 542 aa20.96■□□□□ 0.95
CCDC115-201ENST00000259229 BRF1Q92994 677 aa20.96■□□□□ 0.95
CCDC115-201ENST00000259229 DYNLL2Q96FJ2 89 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms