RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 ERC2O15083 957 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 IGHDP01880 384 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 PPP4CP60510 307 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 MAP2K1Q02750 393 aaPredicted RBP22.65■■□□□ 1.22
UPK3B-201ENST00000257632 SLC9C2Q5TAH2 1124 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 B4GALNT3Q6L9W6 998 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 ZFPM1Q8IX07 1006 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 ANKRD13AQ8IZ07 590 aa22.65■■□□□ 1.22
UPK3B-201ENST00000257632 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.65■■□□□ 1.22
UPK3B-201ENST00000257632 DDX4Q9NQI0 724 aaKnown RBP22.65■■□□□ 1.22
UPK3B-201ENST00000257632 FAM155AB1AL88 458 aaPredicted RBP22.64■■□□□ 1.21
UPK3B-201ENST00000257632 PDE6AP16499 860 aa22.64■■□□□ 1.21
UPK3B-201ENST00000257632 MX1P20591 662 aa22.64■■□□□ 1.21
UPK3B-201ENST00000257632 CERS3Q8IU89 383 aa22.64■■□□□ 1.21
UPK3B-201ENST00000257632 SMC5Q8IY18 1101 aa22.64■■□□□ 1.21
UPK3B-201ENST00000257632 MIGA1Q8NAN2 632 aa22.64■■□□□ 1.21
UPK3B-201ENST00000257632 OTUD7AQ8TE49 926 aaPredicted RBP22.64■■□□□ 1.21
UPK3B-201ENST00000257632 SLC10A4Q96EP9 437 aa22.64■■□□□ 1.21
UPK3B-201ENST00000257632 UNCXA6NJT0 531 aa22.63■■□□□ 1.21
UPK3B-201ENST00000257632 HSPA8P11142 646 aaKnown RBP22.63■■□□□ 1.21
UPK3B-201ENST00000257632 DYNLL1P63167 89 aaKnown RBP22.63■■□□□ 1.21
UPK3B-201ENST00000257632 MIGA2Q7L4E1 593 aa22.63■■□□□ 1.21
UPK3B-201ENST00000257632 CSRNP1Q96S65 589 aa22.63■■□□□ 1.21
UPK3B-201ENST00000257632 BEGAINQ9BUH8 593 aa22.63■■□□□ 1.21
UPK3B-201ENST00000257632 ZNF341Q9BYN7 854 aa22.63■■□□□ 1.21
UPK3B-201ENST00000257632 ZNF532Q9HCE3 1301 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 OTOFQ9HC10 1997 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 NPM3O75607 178 aaKnown RBP22.62■■□□□ 1.21
UPK3B-201ENST00000257632 MAP3K9P80192 1104 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 TGFBRAP1Q8WUH2 860 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 CLMNQ96JQ2 1002 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 LNPKQ9C0E8 428 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 CSADQ9Y600 493 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 MYH7P12883 1935 aa22.62■■□□□ 1.21
UPK3B-201ENST00000257632 GLRX3O76003 335 aaKnown RBP22.61■■□□□ 1.21
UPK3B-201ENST00000257632 KIF23Q02241 960 aaPredicted RBP22.61■■□□□ 1.21
UPK3B-201ENST00000257632 MKRN3Q13064 507 aaKnown RBP22.61■■□□□ 1.21
UPK3B-201ENST00000257632 ZSCAN25Q6NSZ9 544 aa22.61■■□□□ 1.21
UPK3B-201ENST00000257632 WRNIP1Q96S55 665 aa22.61■■□□□ 1.21
UPK3B-201ENST00000257632 ZIC5Q96T25 663 aa22.61■■□□□ 1.21
UPK3B-201ENST00000257632 OSBPL5Q9H0X9 879 aaPredicted RBP22.61■■□□□ 1.21
UPK3B-201ENST00000257632 CDK5RAP2Q96SN8 1893 aa22.6■■□□□ 1.21
UPK3B-201ENST00000257632 MAGEB6P1A0A0J9YX57 407 aa22.6■■□□□ 1.21
UPK3B-201ENST00000257632 DDTLA6NHG4 134 aaPredicted RBP22.6■■□□□ 1.21
UPK3B-201ENST00000257632 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
UPK3B-201ENST00000257632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.6■■□□□ 1.21
UPK3B-201ENST00000257632 ADD2P35612 726 aa22.59■■□□□ 1.21
UPK3B-201ENST00000257632 USP5P45974 858 aa22.59■■□□□ 1.21
UPK3B-201ENST00000257632 SH3BP5LQ7L8J4 393 aa22.59■■□□□ 1.21
UPK3B-201ENST00000257632 ELP3Q9H9T3 547 aa22.59■■□□□ 1.21
UPK3B-201ENST00000257632 FOCADQ5VW36 1801 aa22.59■■□□□ 1.21
UPK3B-201ENST00000257632 VGLL4Q14135 290 aa22.58■■□□□ 1.21
UPK3B-201ENST00000257632 SPRYD7Q5W111 196 aa22.58■■□□□ 1.21
UPK3B-201ENST00000257632 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.58■■□□□ 1.21
UPK3B-201ENST00000257632 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.21
UPK3B-201ENST00000257632 KBTBD3Q8NAB2 608 aa22.58■■□□□ 1.21
UPK3B-201ENST00000257632 PI4K2BQ8TCG2 481 aa22.58■■□□□ 1.21
UPK3B-201ENST00000257632 ATRNL1Q5VV63 1379 aa22.58■■□□□ 1.21
UPK3B-201ENST00000257632 COL2A1P02458 1487 aaPredicted RBP22.58■■□□□ 1.2
UPK3B-201ENST00000257632 FLT1P17948 1338 aa22.57■■□□□ 1.2
UPK3B-201ENST00000257632 TCRBV5S4A2TA0A5A2 114 aa22.57■■□□□ 1.2
UPK3B-201ENST00000257632 WNK4Q96J92 1243 aa22.57■■□□□ 1.2
UPK3B-201ENST00000257632 SALL3Q9BXA9 1300 aa22.57■■□□□ 1.2
UPK3B-201ENST00000257632 PDE1AP54750 535 aa22.56■■□□□ 1.2
UPK3B-201ENST00000257632 NUCB1Q02818 461 aa22.56■■□□□ 1.2
UPK3B-201ENST00000257632 UBE3CQ15386 1083 aa22.56■■□□□ 1.2
UPK3B-201ENST00000257632 LRRFIP1Q32MZ4 808 aaKnown RBP22.56■■□□□ 1.2
UPK3B-201ENST00000257632 REM2Q8IYK8 340 aaPredicted RBP22.56■■□□□ 1.2
UPK3B-201ENST00000257632 ZKSCAN4Q969J2 545 aaPredicted RBP22.56■■□□□ 1.2
UPK3B-201ENST00000257632 RIOK1Q9BRS2 568 aaKnown RBP22.56■■□□□ 1.2
UPK3B-201ENST00000257632 CRNKL1Q9BZJ0 848 aaKnown RBP22.56■■□□□ 1.2
UPK3B-201ENST00000257632 DHX36Q9H2U1 1008 aaKnown RBP22.56■■□□□ 1.2
UPK3B-201ENST00000257632 TSKSQ9UJT2 592 aa22.56■■□□□ 1.2
UPK3B-201ENST00000257632 ZBTB48P10074 688 aaPredicted RBP22.55■■□□□ 1.2
UPK3B-201ENST00000257632 INPP5BP32019 993 aa22.55■■□□□ 1.2
UPK3B-201ENST00000257632 OPTNQ96CV9 577 aa22.55■■□□□ 1.2
UPK3B-201ENST00000257632 STAP2Q9UGK3 403 aa22.55■■□□□ 1.2
UPK3B-201ENST00000257632 SAP30BPQ9UHR5 308 aaKnown RBP22.55■■□□□ 1.2
UPK3B-201ENST00000257632 MYH1P12882 1939 aa22.55■■□□□ 1.2
UPK3B-201ENST00000257632 SLFNL1Q499Z3 407 aa22.54■■□□□ 1.2
UPK3B-201ENST00000257632 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
UPK3B-201ENST00000257632 TRIM34Q9BYJ4 488 aa22.54■■□□□ 1.2
UPK3B-201ENST00000257632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.54■■□□□ 1.2
UPK3B-201ENST00000257632 ZNF112Q9UJU3 913 aa22.54■■□□□ 1.2
UPK3B-201ENST00000257632 MBD4O95243 580 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 HLA-DOAP06340 250 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 SREBF2Q12772 1141 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 LCORLQ8N3X6 602 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 OTUD5Q96G74 571 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 ARMT1Q9H993 441 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 PI4KBQ9UBF8 816 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 PALD1Q9ULE6 856 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 SNCAIPQ9Y6H5 919 aa22.53■■□□□ 1.2
UPK3B-201ENST00000257632 MANSC4A6NHS7 340 aaPredicted RBP22.52■■□□□ 1.2
UPK3B-201ENST00000257632 CA12O43570 354 aa22.52■■□□□ 1.2
UPK3B-201ENST00000257632 TBC1D12O60347 775 aa22.52■■□□□ 1.2
UPK3B-201ENST00000257632 CHGBP05060 677 aa22.52■■□□□ 1.2
UPK3B-201ENST00000257632 ZFYP08048 801 aaPredicted RBP22.52■■□□□ 1.2
UPK3B-201ENST00000257632 ERO1BQ86YB8 467 aa22.52■■□□□ 1.2
UPK3B-201ENST00000257632 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms