RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 C3orf20Q8ND61 904 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 EHBP1Q8NDI1 1231 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 CKAP4Q07065 602 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 TEFQ10587 303 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ITGB3BPQ13352 177 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 TUBB2AQ13885 445 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 MAATS1Q7Z4T9 603 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 PHC3Q8NDX5 983 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 TUBB2BQ9BVA1 445 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ZFYVE16Q7Z3T8 1539 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 SGSM2O43147 1006 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 SERPINI2O75830 405 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 EPS15P42566 896 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ECE1P42892 770 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 CLCN6P51797 869 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ZNF710Q8N1W2 664 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 GAS2L2Q8NHY3 880 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 RAB3IL1Q8TBN0 382 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 NUDT16Q96DE0 195 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 HOOK2Q96ED9 719 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 POLR3CQ9BUI4 534 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 SIL1Q9H173 461 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 SPATA7Q9P0W8 599 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 WDR37Q9Y2I8 494 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 KRT14P02533 472 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 TCP11L2Q8N4U5 519 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 VMP1Q96GC9 406 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ARAP3Q8WWN8 1544 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 RIMS2Q9UQ26 1411 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 WTAPQ15007 396 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 PPP1R21Q6ZMI0 780 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 PARP9Q8IXQ6 854 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 TMEM57Q8N5G2 664 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 NECTIN2Q92692 538 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 STMN2Q93045 179 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 CWC25Q9NXE8 425 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 RASAL2Q9UJF2 1139 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 CASQ2O14958 399 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 SLC26A4O43511 780 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 GPATCH3Q96I76 525 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 CARD6Q9BX69 1037 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 PABPN1LA6NDY0 278 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 GNAT1P11488 350 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 EVA1CP58658 441 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 SAMD3Q8N6K7 520 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 TEX9Q8N6V9 391 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 ABTB2Q8N961 1025 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 FAM204AQ9H8W3 233 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 STXBP3O00186 592 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 MX1P20591 662 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 PDCP20941 246 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 STK3Q13188 491 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 GCC1Q96CN9 775 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 CEP131Q9UPN4 1083 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 SCINQ9Y6U3 715 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 CCDC69A6NI79 296 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 HMOX1P09601 288 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 ADCY1Q08828 1119 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 MYOCDQ8IZQ8 938 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 PDE11AQ9HCR9 933 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 KDM5DQ9BY66 1539 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 KMT5BQ4FZB7 885 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 FBXW10Q5XX13 1052 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 SLC4A10Q6U841 1118 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 ENAHQ8N8S7 591 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 ANO10Q9NW15 660 aa7.54□□□□□ -1.2
PDGFRA-201ENST00000257290 STIM1Q13586 685 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 NLRP9Q7RTR0 991 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 COQ7Q99807 217 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 FAM200BP0CF97 657 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 GNAT2P19087 354 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 CCDC129Q6ZRS4 1044 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 TTC5Q8N0Z6 440 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 ATP6V1E2Q96A05 226 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 BICC1Q9H694 974 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 CCDC61Q9Y6R9 512 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 WASLO00401 505 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 NOP14P78316 857 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 MYO1EQ12965 1108 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 PPP4R4Q6NUP7 873 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 COMMD10Q9Y6G5 202 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 FMNL1O95466 1100 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 ZNF165P49910 485 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 POLR2FP61218 127 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 PDE1BQ01064 536 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 ROR2Q01974 943 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 SEPT2Q15019 361 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 OTUD6AQ7L8S5 288 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 DZIP3Q86Y13 1208 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 SLC39A3Q9BRY0 314 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 SUPT3HO75486 399 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 NAT1P18440 290 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 S100A1P23297 94 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms