RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 KRT23Q9C075 422 aa21.18■□□□□ 0.98
LRP3-201ENST00000253193 UBE3CQ15386 1083 aa21.18■□□□□ 0.98
LRP3-201ENST00000253193 SEC31BQ9NQW1 1179 aa21.18■□□□□ 0.98
LRP3-201ENST00000253193 SLIT3O75094 1523 aa21.17■□□□□ 0.98
LRP3-201ENST00000253193 PATL2C9JE40 543 aaKnown RBP21.17■□□□□ 0.98
LRP3-201ENST00000253193 PRDM1O75626 825 aa21.17■□□□□ 0.98
LRP3-201ENST00000253193 FEZ1Q99689 392 aa21.17■□□□□ 0.98
LRP3-201ENST00000253193 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 CCP110O43303 1012 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 ERCC6LQ2NKX8 1250 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 STRBPQ96SI9 672 aaKnown RBP21.16■□□□□ 0.98
LRP3-201ENST00000253193 CNNM2Q9H8M5 875 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 CRYBG1Q9Y4K1 1723 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 STX17P56962 302 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 AKNAD1Q5T1N1 836 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 SHC4Q6S5L8 630 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 LRRN4CLQ8ND94 238 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 DHX58Q96C10 678 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 PPP1R13BQ96KQ4 1090 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 DDX41Q9UJV9 622 aaKnown RBP21.16■□□□□ 0.98
LRP3-201ENST00000253193 MROH7-TTC4A0A0A0MT08 1334 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 AXDND1Q5T1B0 1012 aaPredicted RBP21.16■□□□□ 0.98
LRP3-201ENST00000253193 ARMCX5Q6P1M9 558 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 GRAMD1CQ8IYS0 662 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 ERO1AQ96HE7 468 aa21.16■□□□□ 0.98
LRP3-201ENST00000253193 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.16■□□□□ 0.98
LRP3-201ENST00000253193 FOXP2O15409 715 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 NR5A1Q13285 461 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 FOXN1O15353 648 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 CUTAO60888 179 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 CSF1RP07333 972 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 NOSTRINQ8IVI9 506 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 ZNF397Q8NF99 534 aaPredicted RBP21.15■□□□□ 0.98
LRP3-201ENST00000253193 SDR42E1Q8WUS8 393 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 GNG11P61952 73 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 RASGRF1Q13972 1273 aa21.15■□□□□ 0.98
LRP3-201ENST00000253193 MARF1Q9Y4F3 1742 aaKnown RBP21.14■□□□□ 0.98
LRP3-201ENST00000253193 KIF20AO95235 890 aa21.14■□□□□ 0.98
LRP3-201ENST00000253193 SERTAD1Q9UHV2 236 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 DACH1Q9UI36 760 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 NIP7Q9Y221 180 aaKnown RBP eCLIP21.14■□□□□ 0.97
LRP3-201ENST00000253193 NFE2L3Q9Y4A8 694 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 GUCY1A2P33402 732 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 MST1RQ04912 1400 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 TRIM28Q13263 835 aaKnown RBP21.14■□□□□ 0.97
LRP3-201ENST00000253193 FBXO38Q6PIJ6 1188 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 KRBA2Q6ZNG9 492 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 DPF2Q92785 391 aa21.14■□□□□ 0.97
LRP3-201ENST00000253193 ARHGAP29Q52LW3 1261 aa21.13■□□□□ 0.97
LRP3-201ENST00000253193 ARGLU1Q9NWB6 273 aaPredicted RBP21.13■□□□□ 0.97
LRP3-201ENST00000253193 PODXL2Q9NZ53 605 aa21.13■□□□□ 0.97
LRP3-201ENST00000253193 DHX8Q14562 1220 aaKnown RBP21.13■□□□□ 0.97
LRP3-201ENST00000253193 NBPF11Q86T75 865 aa21.13■□□□□ 0.97
LRP3-201ENST00000253193 ZBTB9Q96C00 473 aa21.13■□□□□ 0.97
LRP3-201ENST00000253193 RNF41Q9H4P4 317 aaPredicted RBP21.13■□□□□ 0.97
LRP3-201ENST00000253193 ZSWIM4Q9H7M6 989 aa21.13■□□□□ 0.97
LRP3-201ENST00000253193 CHD2O14647 1828 aaKnown RBP21.13■□□□□ 0.97
LRP3-201ENST00000253193 BRMS1Q9HCU9 246 aa21.13■□□□□ 0.97
LRP3-201ENST00000253193 ZSCAN12O43309 604 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 ADKP55263 362 aaKnown RBP21.12■□□□□ 0.97
LRP3-201ENST00000253193 E4F1Q66K89 784 aaPredicted RBP21.12■□□□□ 0.97
LRP3-201ENST00000253193 LCORLQ8N3X6 602 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 LY9Q9HBG7 655 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 CEP131Q9UPN4 1083 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 N4BP2Q86UW6 1770 aaPredicted RBP21.12■□□□□ 0.97
LRP3-201ENST00000253193 TMEM232C9JQI7 657 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 ZBTB22O15209 634 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 EVCP57679 992 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 TICAM2Q86XR7 235 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 PPFIBP1Q86W92 1011 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 GNL3LQ9NVN8 582 aaKnown RBP21.12■□□□□ 0.97
LRP3-201ENST00000253193 UBN2Q6ZU65 1347 aa21.12■□□□□ 0.97
LRP3-201ENST00000253193 POSTNQ15063 836 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 CCDC152Q4G0S7 254 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 NKX2-3Q8TAU0 364 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 STAMQ92783 540 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 OSBPL5Q9H0X9 879 aaPredicted RBP21.11■□□□□ 0.97
LRP3-201ENST00000253193 VPS54Q9P1Q0 977 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 ERICH4A6NGS2 130 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 PPP6R2O75170 966 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 ADAMTS2O95450 1211 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 NYAP1Q6ZVC0 841 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 KRT222Q8N1A0 295 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 SLFN14P0C7P3 912 aa21.11■□□□□ 0.97
LRP3-201ENST00000253193 KARSQ15046 597 aaKnown RBP21.1■□□□□ 0.97
LRP3-201ENST00000253193 TEX35Q5T0J7 233 aa21.1■□□□□ 0.97
LRP3-201ENST00000253193 IGDCC4Q8TDY8 1250 aa21.1■□□□□ 0.97
LRP3-201ENST00000253193 RILPL1Q5EBL4 403 aa21.1■□□□□ 0.97
LRP3-201ENST00000253193 ESR2Q92731 530 aa21.1■□□□□ 0.97
LRP3-201ENST00000253193 V9GY48 417 aaPredicted RBP21.1■□□□□ 0.97
LRP3-201ENST00000253193 PCDHB6Q9Y5E3 794 aa21.1■□□□□ 0.97
LRP3-201ENST00000253193 MROH5Q6ZUA9 1318 aa21.1■□□□□ 0.97
LRP3-201ENST00000253193 CASQ1P31415 396 aa21.09■□□□□ 0.97
LRP3-201ENST00000253193 BAG1Q99933 345 aaPredicted RBP21.09■□□□□ 0.97
LRP3-201ENST00000253193 NBPF3Q9H094 633 aa21.09■□□□□ 0.97
LRP3-201ENST00000253193 JAG2Q9Y219 1238 aa21.09■□□□□ 0.97
LRP3-201ENST00000253193 CATIPQ7Z7H3 387 aa21.09■□□□□ 0.97
LRP3-201ENST00000253193 IQCA1Q86XH1 822 aa21.09■□□□□ 0.97
LRP3-201ENST00000253193 TRIM75PA6NK02 468 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms