RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 UBE3CQ15386 1083 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 ANO6Q4KMQ2 910 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 NYAP1Q6ZVC0 841 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TMEM139Q8IV31 216 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 ANKRD7Q92527 254 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF594Q96JF6 807 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 NEK1Q96PY6 1258 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 PIH1D3Q9NQM4 214 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 TCEAL9Q9UHQ7 104 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 SPATA31A5Q5VU36 1347 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 SPATA31A7Q8IWB4 1347 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 ATP5J2-PTCD1G3V325 749 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 PTCD1O75127 700 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 NR1I2O75469 434 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 IVLP07476 585 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 MYL6BP14649 208 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 IL6STP40189 918 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 ZSCAN25Q6NSZ9 544 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 RALYLQ86SE5 291 aaKnown RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 FCHSD1Q86WN1 690 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 GPHNQ9NQX3 736 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-201ENST00000252108 POLR3EQ9NVU0 708 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 MYH7BA7E2Y1 1941 aa4.79□□□□□ -1.64
UBE4A-201ENST00000252108 KCNJ6P48051 423 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 RCAN1P53805 252 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SEC23AQ15436 765 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 FAM173BQ6P4H8 233 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SENP2Q9HC62 589 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 PSDA5PKW4 1024 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 M0R2N6 131 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SH2B2O14492 632 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 BMP6P22004 513 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 FECHP22830 423 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 ME1P48163 572 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 TIMM10P62072 90 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 Q6ZUG5 572 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 C16orf45Q96MC5 204 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 PYM1Q9BRP8 204 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SKILP12757 684 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 TM4SF1P30408 202 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 ITPK1Q13572 414 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 GORABQ5T7V8 394 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 IQCEQ6IPM2 695 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 KANK3Q6NY19 840 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 CYB5R4Q7L1T6 521 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 BRAPQ7Z569 592 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 LINC00301Q8NCQ3 95 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 JARID2Q92833 1246 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 XAGE2Q96GT9 111 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 DACT1Q9NYF0 836 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 PRDM4Q9UKN5 801 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 FGAP02671 866 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SARSP49591 514 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC144BQ3MJ40 725 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 MAP9Q49MG5 647 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SLC10A5Q5PT55 438 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 TTLL5Q6EMB2 1281 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 RIC3Q7Z5B4 369 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 ADGRA1Q86SQ6 560 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 DNAJC10Q8IXB1 793 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC144CPQ8IYA2 1237 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 SYTL4Q96C24 671 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 STRBPQ96SI9 672 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 NLRP2Q9NX02 1062 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 IPO7O95373 1038 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 ATF3P18847 181 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 CTSWP56202 376 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 CCZ1BP86790 482 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 CCZ1P86791 482 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 PI16Q6UXB8 463 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 MRPS27Q92552 414 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 RIOK1Q9BRS2 568 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 FTOQ9C0B1 505 aaKnown RBP eCLIP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 GREM2Q9H772 168 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 LY9Q9HBG7 655 aa4.78□□□□□ -1.64
UBE4A-201ENST00000252108 THRAP3Q9Y2W1 955 aaKnown RBP4.78□□□□□ -1.64
UBE4A-201ENST00000252108 BRCA1P38398 1863 aaKnown RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 XBP1P17861 261 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 PTGS1P23219 599 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 HSPA2P54652 639 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 AMIGO3Q86WK7 504 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 BRF1Q92994 677 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC47Q96A33 483 aaKnown RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 PYCARDQ9ULZ3 195 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 CEP131Q9UPN4 1083 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 CHMP3Q9Y3E7 222 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 PDE8BO95263 885 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 DDX46Q7L014 1031 aaKnown RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 MARCH10Q8NA82 808 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 APPBP2Q92624 585 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 TCEANC2Q96MN5 208 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 USP28Q96RU2 1077 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 CBX8Q9HC52 389 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 INTS13Q9NVM9 706 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 ZBTB1Q9Y2K1 713 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 SERPINC1P01008 464 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 TOB1P50616 345 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 CABP4P57796 275 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms