RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZKSCAN3Q9BRR0 538 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 KRT23Q9C075 422 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 PFKFB1P16118 471 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 CMA1P23946 247 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 RRP12Q5JTH9 1297 aaKnown RBP22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 STK11IPQ8N1F8 1099 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 PRIMPOLQ96LW4 560 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 CCDC69A6NI79 296 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 AOPEPQ8N6M6 819 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 MRFAP1L1Q96HT8 127 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 NACAP1Q9BZK3 213 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 PTPAQ15257 358 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 DPCR1Q3MIW9 517 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 ERFEQ4G0M1 354 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 CACTINQ8WUQ7 758 aaKnown RBP22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 MAP3K14Q99558 947 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 SLC26A6Q9BXS9 759 aa22.65■■□□□ 1.22
CDC42EP1-201ENST00000249014 ZNF652Q9Y2D9 606 aa22.64■■□□□ 1.21
CDC42EP1-201ENST00000249014 ZNF804BA4D1E1 1349 aa22.64■■□□□ 1.21
CDC42EP1-201ENST00000249014 NID2Q14112 1375 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 GYG1P46976 350 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 BARGINQ6ZT62 677 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 CDC5LQ99459 802 aaKnown RBP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 TOMM22Q9NS69 142 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 FAM13BQ9NYF5 915 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 STK36Q9NRP7 1315 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 COL1A1P02452 1464 aaPredicted RBP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 FMNL1O95466 1100 aaPredicted RBP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 CYP7A1P22680 504 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 GUCY1A2P33402 732 aa22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 SSRP1Q08945 709 aaKnown RBP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 GNL2Q13823 731 aaKnown RBP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 NAT10Q9H0A0 1025 aaKnown RBP22.63■■□□□ 1.21
CDC42EP1-201ENST00000249014 SLC3A2P08195 630 aaKnown RBP22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 KCNQ4P56696 695 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 LINC00116Q8NCU8 138 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 SDR42E1Q8WUS8 393 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 ABCF2Q9UG63 623 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 PPP6R2O75170 966 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 IFNAR1P17181 557 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 TRIM29Q14134 588 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 SHC4Q6S5L8 630 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 SMARCC1Q92922 1105 aaPredicted RBP22.62■■□□□ 1.21
CDC42EP1-201ENST00000249014 CACNA1SQ13698 1873 aa22.61■■□□□ 1.21
CDC42EP1-201ENST00000249014 SMIM22K7EJ46 135 aa22.61■■□□□ 1.21
CDC42EP1-201ENST00000249014 BIN1O00499 593 aa22.61■■□□□ 1.21
CDC42EP1-201ENST00000249014 WTAPQ15007 396 aa22.61■■□□□ 1.21
CDC42EP1-201ENST00000249014 ANKRD18AQ8IVF6 992 aa22.61■■□□□ 1.21
CDC42EP1-201ENST00000249014 PPARAQ07869 468 aa22.6■■□□□ 1.21
CDC42EP1-201ENST00000249014 ARID5BQ14865 1188 aa22.6■■□□□ 1.21
CDC42EP1-201ENST00000249014 HPSEQ9Y251 543 aa22.6■■□□□ 1.21
CDC42EP1-201ENST00000249014 SF3B3Q15393 1217 aaKnown RBP22.6■■□□□ 1.21
CDC42EP1-201ENST00000249014 SMIM5Q71RC9 77 aa22.6■■□□□ 1.21
CDC42EP1-201ENST00000249014 SART3Q15020 963 aaKnown RBP22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 RTN1Q16799 776 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 NBPF11Q86T75 865 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 LRRC8AQ8IWT6 810 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 CMTR1Q8N1G2 835 aaKnown RBP22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 CLIC6Q96NY7 704 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 BPIFA3Q9BQP9 254 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 RAI14Q9P0K7 980 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 ZNF831Q5JPB2 1677 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 SYKP43405 635 aa22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 BSDC1Q9NW68 430 aaPredicted RBP22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 BAZ2AQ9UIF9 1905 aaKnown RBP22.59■■□□□ 1.21
CDC42EP1-201ENST00000249014 SCN7AQ01118 1682 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 MAGEB6P1A0A0J9YX57 407 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 MINDY4BA8MYZ0 360 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 GTF2F1P35269 517 aaKnown RBP eCLIP22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 NLRP12P59046 1061 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 RBM6P78332 1123 aaKnown RBP22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 UBE4AQ14139 1066 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 ZRSR1Q15695 479 aaKnown RBP22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 CCDC82Q8N4S0 544 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 TSC1Q92574 1164 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 PDCL3Q9H2J4 239 aa22.58■■□□□ 1.21
CDC42EP1-201ENST00000249014 BTBD18B2RXH4 712 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 MMP1P03956 469 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 BICDL1Q6ZP65 573 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 JMYQ8N9B5 988 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 TIGD1Q96MW7 591 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 RIOK1Q9BRS2 568 aaKnown RBP22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 RNF41Q9H4P4 317 aaPredicted RBP22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 MINPP1Q9UNW1 487 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 KCNJ14Q9UNX9 436 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 MYH2Q9UKX2 1941 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 ERICH2A1L162 156 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 RESP18Q5W5W9 173 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 NOSTRINQ8IVI9 506 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
CDC42EP1-201ENST00000249014 FAM237AA0A1B0GTK4 181 aa22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 ZNF654Q8IZM8 581 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms