RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 ANKRD7Q92527 254 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-202ENST00000244303 PAXBP1Q9Y5B6 917 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 TIAM2Q8IVF5 1701 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 KCNQ2O43526 872 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 MBD4O95243 580 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 RASGRF1Q13972 1273 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 PARP10Q53GL7 1025 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 NAPBQ9H115 298 aa16.64■□□□□ 0.25
HIF3A-202ENST00000244303 UBE2Q2LH0YL09 131 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 PPP6R2O75170 966 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 SLC5A1P13866 664 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 SYKP43405 635 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 PTPAQ15257 358 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 CEP135Q66GS9 1140 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 XPO4Q9C0E2 1151 aaKnown RBP16.63■□□□□ 0.25
HIF3A-202ENST00000244303 ARMT1Q9H993 441 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 BCORQ6W2J9 1755 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 SMC2O95347 1197 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 GSDMDP57764 484 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 CBX1P83916 185 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 MAP3K12Q12852 859 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 NCAPHQ15003 741 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 ISM2Q6H9L7 571 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 SHC4Q6S5L8 630 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 ZNF592Q92610 1267 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
HIF3A-202ENST00000244303 MAP3K14Q99558 947 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 OSBPL5Q9H0X9 879 aaPredicted RBP16.63■□□□□ 0.25
HIF3A-202ENST00000244303 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 IFNKQ9P0W0 207 aa16.63■□□□□ 0.25
HIF3A-202ENST00000244303 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
HIF3A-202ENST00000244303 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.25
HIF3A-202ENST00000244303 LIFRP42702 1097 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 TRIM29Q14134 588 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 IMPACTQ9P2X3 320 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
HIF3A-202ENST00000244303 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 RREB1Q92766 1687 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
HIF3A-202ENST00000244303 TOM1O60784 492 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 NYAP1Q6ZVC0 841 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 JMYQ8N9B5 988 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
HIF3A-202ENST00000244303 TRMT1Q9NXH9 659 aaKnown RBP16.62■□□□□ 0.25
HIF3A-202ENST00000244303 GSG1L2A8MUP6 293 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 NTSR2O95665 410 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
HIF3A-202ENST00000244303 PTPN14Q15678 1187 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 TMC6Q7Z403 805 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 CLIC6Q96NY7 704 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.61■□□□□ 0.25
HIF3A-202ENST00000244303 PRKAB2O43741 272 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 TPM4P67936 248 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 SSRP1Q08945 709 aaKnown RBP16.61■□□□□ 0.25
HIF3A-202ENST00000244303 AKNAD1Q5T1N1 836 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 CCAR2Q8N163 923 aaKnown RBP16.61■□□□□ 0.25
HIF3A-202ENST00000244303 TUBE1Q9UJT0 475 aa16.61■□□□□ 0.25
HIF3A-202ENST00000244303 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
HIF3A-202ENST00000244303 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
HIF3A-202ENST00000244303 CNNM2Q9H8M5 875 aa16.6■□□□□ 0.25
HIF3A-202ENST00000244303 MYH6P13533 1939 aa16.6■□□□□ 0.25
HIF3A-202ENST00000244303 STK36Q9NRP7 1315 aa16.6■□□□□ 0.25
HIF3A-202ENST00000244303 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 LMOD1P29536 600 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 PNOCQ13519 176 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 FAM98CQ17RN3 349 aaKnown RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 MFSD6Q6ZSS7 791 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 FAM237AA0A1B0GTK4 181 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 BCAMP50895 628 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 ARMCX5Q6P1M9 558 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 KRT23Q9C075 422 aa16.59■□□□□ 0.25
HIF3A-202ENST00000244303 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 ZHX1Q9UKY1 873 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-202ENST00000244303 IKBKBO14920 756 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 GUCY1A2P33402 732 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 TDO2P48775 406 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 DMTNQ08495 405 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 SYCP1Q15431 976 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 HSD3B7Q9H2F3 369 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 TOMM22Q9NS69 142 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 KCND1Q9NSA2 647 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 SLC4A4Q9Y6R1 1079 aa16.58■□□□□ 0.25
HIF3A-202ENST00000244303 CUTAO60888 179 aa16.58■□□□□ 0.24
HIF3A-202ENST00000244303 ATP1A3P13637 1013 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms