RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 FMNL1O95466 1100 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-201ENST00000237186 RXRAP19793 462 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 NOLC1Q14978 699 aaKnown RBP eCLIP18.77■□□□□ 0.6
UBE3D-201ENST00000237186 PHKBQ93100 1093 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 FAM84BQ96KN1 310 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-201ENST00000237186 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
UBE3D-201ENST00000237186 NYXQ9GZU5 481 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 A0A1B0GVL5 298 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 PPP6R2O75170 966 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 CDC25BP30305 580 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 GYG1P46976 350 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 NDUFA8P51970 172 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 CAVIN4Q5BKX8 364 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 FBXO33Q7Z6M2 555 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 MPNDQ8N594 471 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 WASF1Q92558 559 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 AIFM3Q96NN9 605 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 PDS5AQ29RF7 1337 aaKnown RBP18.77■□□□□ 0.59
UBE3D-201ENST00000237186 COL4A1P02462 1669 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 PPARAQ07869 468 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 SSRP1Q08945 709 aaKnown RBP18.76■□□□□ 0.59
UBE3D-201ENST00000237186 TBC1D9BQ66K14 1250 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 C11orf57Q6ZUT1 292 aaPredicted RBP18.76■□□□□ 0.59
UBE3D-201ENST00000237186 ADGRA1Q86SQ6 560 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 MIGA1Q8NAN2 632 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 KIAA1524Q8TCG1 905 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 KCNF1Q9H3M0 494 aa18.76■□□□□ 0.59
UBE3D-201ENST00000237186 R3HCC1Q9Y3T6 440 aaKnown RBP18.76■□□□□ 0.59
UBE3D-201ENST00000237186 MAGEB6P1A0A0J9YX57 407 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 FAM237AA0A1B0GTK4 181 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 SDF4Q9BRK5 362 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.75■□□□□ 0.59
UBE3D-201ENST00000237186 CCDC196A0A1B0GTZ2 297 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 TRIM29Q14134 588 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 WTAPQ15007 396 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 PPP2R5BQ15173 497 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 PTPAQ15257 358 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 PTF1AQ7RTS3 328 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 CELF1Q92879 486 aaKnown RBP18.75■□□□□ 0.59
UBE3D-201ENST00000237186 TIGD1Q96MW7 591 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.75■□□□□ 0.59
UBE3D-201ENST00000237186 RAI14Q9P0K7 980 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 KIAA1468Q9P260 1216 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 ABCF2Q9UG63 623 aa18.75■□□□□ 0.59
UBE3D-201ENST00000237186 TRPC5Q9UL62 973 aaPredicted RBP18.75■□□□□ 0.59
UBE3D-201ENST00000237186 ERICH2A1L162 156 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 GOLGA6L19H0YKK7 550 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 FGRP09769 529 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 RPS8P62241 208 aaKnown RBP18.74■□□□□ 0.59
UBE3D-201ENST00000237186 FAM182BQ5T319 152 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 TMED8Q6PL24 325 aaPredicted RBP18.74■□□□□ 0.59
UBE3D-201ENST00000237186 SPC24Q8NBT2 197 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 MAP3K14Q99558 947 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 BRIP1Q9BX63 1249 aa18.74■□□□□ 0.59
UBE3D-201ENST00000237186 COL1A1P02452 1464 aaPredicted RBP18.74■□□□□ 0.59
UBE3D-201ENST00000237186 WDHD1O75717 1129 aaPredicted RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 ZNF202O95125 648 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 PCP11498 1178 aaKnown RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 GTF2E1P29083 439 aaPredicted RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 RTN1Q16799 776 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 CCDC144CPQ8IYA2 1237 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 NLRP3Q96P20 1036 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 BPIFA3Q9BQP9 254 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 MYL10Q9BUA6 226 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 NAT10Q9H0A0 1025 aaKnown RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 IQSEC3Q9UPP2 1182 aaPredicted RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 NBPF11Q86T75 865 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 DHX40Q8IX18 779 aaKnown RBP18.73■□□□□ 0.59
UBE3D-201ENST00000237186 CEP57L1Q8IYX8 460 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 ESR2Q92731 530 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 ANKRD2Q9GZV1 360 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 HPSEQ9Y251 543 aa18.73■□□□□ 0.59
UBE3D-201ENST00000237186 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
UBE3D-201ENST00000237186 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
UBE3D-201ENST00000237186 SEC23AQ15436 765 aa18.72■□□□□ 0.59
UBE3D-201ENST00000237186 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
UBE3D-201ENST00000237186 SDR42E1Q8WUS8 393 aa18.72■□□□□ 0.59
UBE3D-201ENST00000237186 RRP12Q5JTH9 1297 aaKnown RBP18.71■□□□□ 0.59
UBE3D-201ENST00000237186 BICDL1Q6ZP65 573 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 TRIM22Q8IYM9 498 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 FANCBQ8NB91 859 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 BECN2A8MW95 431 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 IGSF3O75054 1194 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 DEXIO95424 95 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 MMP1P03956 469 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 PFKFB1P16118 471 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 KCNQ4P56696 695 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 GNL2Q13823 731 aaKnown RBP18.71■□□□□ 0.59
UBE3D-201ENST00000237186 TPTE2Q6XPS3 522 aa18.71■□□□□ 0.59
UBE3D-201ENST00000237186 SCN7AQ01118 1682 aa18.7■□□□□ 0.58
UBE3D-201ENST00000237186 NHSQ6T4R5 1651 aa18.7■□□□□ 0.58
UBE3D-201ENST00000237186 PTGS1P23219 599 aa18.7■□□□□ 0.58
UBE3D-201ENST00000237186 CCDC186Q7Z3E2 898 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms