RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 GAKO14976 1311 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP17L12C9JPN9 530 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP17L21D6R901 530 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 PSMD14O00487 310 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 IGSF3O75054 1194 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 CYP2D6P10635 497 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 RHBDL3P58872 404 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 EXOSC10Q01780 885 aaKnown RBP11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 CTR9Q6PD62 1173 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 TGFBRAP1Q8WUH2 860 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
PRAMEF4-201ENST00000235349 MYH1P12882 1939 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 GOLGA6L22H0YM25 854 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 LARGE1O95461 756 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 BAG3O95817 575 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 RAB3GAP1Q15042 981 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 VPS33BQ9H267 617 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 ZNRF3Q9ULT6 936 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 ZMYM6O95789 1325 aa11.98□□□□□ -0.49
PRAMEF4-201ENST00000235349 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 CRKP46108 304 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 PPARAQ07869 468 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 Q6ZUG5 572 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 DHX32Q7L7V1 743 aaKnown RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 MAPKAPK5Q8IW41 473 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 NOL10Q9BSC4 688 aaKnown RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 ATP8A2Q9NTI2 1148 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 NEDD4P46934 1319 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 ECM29Q5VYK3 1845 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 B4E1Z4 1266 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 DTNBO60941 627 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP5P45974 858 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 ANTXR2P58335 489 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 CXCL9Q07325 125 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 GIMAP6Q6P9H5 292 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 TEX11Q8IYF3 940 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 ANP32BQ92688 251 aaKnown RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 GMLQ99445 158 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 PANK2Q9BZ23 570 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 ALDH8A1Q9H2A2 487 aaPredicted RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 SAP30BPQ9UHR5 308 aaKnown RBP11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 TPCN1Q9ULQ1 816 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 LIMCH1Q9UPQ0 1083 aa11.97□□□□□ -0.49
PRAMEF4-201ENST00000235349 SBF1O95248 1867 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 MCM2P49736 904 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 AKNAD1Q5T1N1 836 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 CDC42EP5Q6NZY7 148 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 MCM9Q9NXL9 1143 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
PRAMEF4-201ENST00000235349 FOCADQ5VW36 1801 aa11.96□□□□□ -0.5
PRAMEF4-201ENST00000235349 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 RBM5P52756 815 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 ME3Q16798 604 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 HS1BP3Q53T59 392 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 PPP1R9BQ96SB3 815 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 MRIQ9BWK5 157 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZSWIM5Q9P217 1185 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 NAV1Q8NEY1 1877 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 PRC1O43663 620 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 PLCD1P51178 756 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 SBK1Q52WX2 424 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 NECAB1Q8N987 351 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 STAG1Q8WVM7 1258 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 TNPO1Q92973 898 aaKnown RBP11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 DDX4Q9NQI0 724 aaKnown RBP11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
PRAMEF4-201ENST00000235349 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 PRDM1O75626 825 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 PLCG2P16885 1265 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 MCM5P33992 734 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 HDLBPQ00341 1268 aaKnown RBP11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms