RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 A0A1W2PQ27 194 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 A0A1W2PQ64 194 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 A0A1W2PQD8 194 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 CYP7A1P22680 504 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 DYNLL1P63167 89 aaKnown RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 CCZ1BP86790 482 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 CCZ1P86791 482 aaPredicted RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 CPLX2Q6PUV4 134 aaKnown RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 BRAPQ7Z569 592 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 MRFAP1L1Q96HT8 127 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 NAT10Q9H0A0 1025 aaKnown RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 UQCRFS1P1P0C7P4 283 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 CMA1P23946 247 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 ARID4AP29374 1257 aaPredicted RBP10.57□□□□□ -0.72
SYDE2-201ENST00000234668 CHRNDQ07001 517 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 SSRP1Q08945 709 aaKnown RBP10.57□□□□□ -0.72
SYDE2-201ENST00000234668 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 NUP188Q5SRE5 1749 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 COBLO75128 1261 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 CASP1P29466 404 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
SYDE2-201ENST00000234668 NCAPHQ15003 741 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 PTPAQ15257 358 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 AKNAD1Q5T1N1 836 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 ARMCX5Q6P1M9 558 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 SARM1Q6SZW1 724 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 DIS3L2Q8IYB7 885 aaKnown RBP10.57□□□□□ -0.72
SYDE2-201ENST00000234668 FBXL16Q8N461 479 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 PDCL2Q8N4E4 241 aa10.57□□□□□ -0.72
SYDE2-201ENST00000234668 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 EIF5P55010 431 aaKnown RBP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 PDE4BQ07343 736 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 PTPN14Q15678 1187 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 FAM177A1Q8N128 213 aaPredicted RBP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 PCDHB6Q9Y5E3 794 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 BCL9O00512 1426 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 IGHMBP2P38935 993 aaKnown RBP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 TOB1P50616 345 aaPredicted RBP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 NLRP12P59046 1061 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 WTAPQ15007 396 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 PTF1AQ7RTS3 328 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
SYDE2-201ENST00000234668 CNNM3Q8NE01 707 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 MTMR7Q9Y216 660 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 PCDHA5Q9Y5H7 936 aa10.56□□□□□ -0.72
SYDE2-201ENST00000234668 LAMB4A4D0S4 1761 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 LOC102724428A0A0B4J2F2 783 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 CAVIN2O95810 425 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 SERPINC1P01008 464 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 KLRK1P26718 216 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 SIK1P57059 783 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 FANCCQ00597 558 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 NCBP1Q09161 790 aaKnown RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 METTL16Q86W50 562 aaKnown RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 CCDC87Q9NVE4 849 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 FANCLQ9NW38 375 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 KCNH3Q9ULD8 1083 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 POLR2DO15514 142 aaKnown RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 BMP6P22004 513 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 DDB1Q16531 1140 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 RTN1Q16799 776 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 STAMQ92783 540 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 TMEM87BQ96K49 555 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 MAP7D2Q96T17 732 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 VPS54Q9P1Q0 977 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 MROH5Q6ZUA9 1318 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 NMT2O60551 498 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 CDKL5O76039 1030 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 CFAP100Q494V2 611 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 ERFEQ4G0M1 354 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 MARCH10Q8NA82 808 aaPredicted RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 HSD3B7Q9H2F3 369 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 TFCP2L1Q9NZI6 479 aa10.55□□□□□ -0.72
SYDE2-201ENST00000234668 ZNF215Q9UL58 517 aaPredicted RBP10.55□□□□□ -0.72
SYDE2-201ENST00000234668 CAMTA2O94983 1202 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 CDC25BP30305 580 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 CCAR2Q8N163 923 aaKnown RBP10.54□□□□□ -0.72
SYDE2-201ENST00000234668 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
SYDE2-201ENST00000234668 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 AKAP11Q9UKA4 1901 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 ERVV-1B6SEH8 477 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 WNT7AO00755 349 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 UBASH3AP57075 661 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 CCDC152Q4G0S7 254 aa10.54□□□□□ -0.72
SYDE2-201ENST00000234668 E4F1Q66K89 784 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms