RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TMC6Q7Z403 805 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 MROH7-TTC4A0A0A0MT08 1334 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 GPAA1O43292 621 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 NEMFO60524 1076 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 CIAO1O76071 339 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 E4F1Q66K89 784 aaPredicted RBP10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 NAT10Q9H0A0 1025 aaKnown RBP10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 INCENPQ9NQS7 918 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 POLR3EQ9NVU0 708 aa10.84□□□□□ -0.67
HLA-DOA-201ENST00000229829 SLC3A2P08195 630 aaKnown RBP10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 ATP1A3P13637 1013 aa10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 PFKFB1P16118 471 aa10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 LMOD1P29536 600 aaPredicted RBP10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 CYP2C19P33261 490 aa10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 KIF23Q02241 960 aaPredicted RBP10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 NCAPHQ15003 741 aa10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 LRRN4CLQ8ND94 238 aa10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 ERO1AQ96HE7 468 aa10.83□□□□□ -0.67
HLA-DOA-201ENST00000229829 ZNF213O14771 459 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 DHX16O60231 1041 aaKnown RBP10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 CLCN6P51797 869 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 ANO1Q5XXA6 986 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZNF772Q68DY9 489 aaPredicted RBP10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 SYNE3Q6ZMZ3 975 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 FBXL16Q8N461 479 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 PHKBQ93100 1093 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 SMARCE1Q969G3 411 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 CWC15Q9P013 229 aaKnown RBP10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZRSR1Q15695 479 aaKnown RBP10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 TOM1L2Q6ZVM7 507 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 CYB5R4Q7L1T6 521 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 KCNG4Q8TDN1 519 aa10.83□□□□□ -0.68
HLA-DOA-201ENST00000229829 YEATS4O95619 227 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 BRD2P25440 801 aaKnown RBP10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 MCAMP43121 646 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 SYCP1Q15431 976 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 APPBP2Q92624 585 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 ISCA1Q9BUE6 129 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 OSBPL5Q9H0X9 879 aaPredicted RBP10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 PATL2C9JE40 543 aaKnown RBP10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 PNMA6AP0CW24 399 aaPredicted RBP10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 OAS2P29728 719 aaKnown RBP10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 TBC1D10CQ8IV04 446 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 HSD3B7Q9H2F3 369 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 ATG3Q9NT62 314 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 CDC27P30260 824 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 GOLGA8FQ08AF8 430 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 GOLGA8DPQ0D2H9 430 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 TCIRG1Q13488 830 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 TXLNBQ8N3L3 684 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 DPF2Q92785 391 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 MYL10Q9BUA6 226 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZNF446Q9NWS9 450 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 DNAI1Q9UI46 699 aa10.82□□□□□ -0.68
HLA-DOA-201ENST00000229829 GPTP24298 496 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 NLRP12P59046 1061 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 DEF6Q9H4E7 631 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 PLEKHA4Q9H4M7 779 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 ARAP2Q8WZ64 1704 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 TULP2O00295 520 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 PHACTR2O75167 634 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 SLC9C2Q5TAH2 1124 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 PPP1R13BQ96KQ4 1090 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 ADAMTSL1Q8N6G6 1762 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 B4E1Z4 1266 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZFYP08048 801 aaPredicted RBP10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 CMA1P23946 247 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 CASQ1P31415 396 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 PNOCQ13519 176 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 SHC4Q6S5L8 630 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 BRAPQ7Z569 592 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 MICU3Q86XE3 530 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 VPS37DQ86XT2 251 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 ALG1Q9BT22 464 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 AKAP2Q9Y2D5 859 aa10.81□□□□□ -0.68
HLA-DOA-201ENST00000229829 MYO5AQ9Y4I1 1855 aaKnown RBP10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 GSDMDP57764 484 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 IFIT5Q13325 482 aaKnown RBP10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 SLC39A14Q15043 492 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 AK7Q96M32 723 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 KCPQ6ZWJ8 1503 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 PCDH11XQ9BZA7 1347 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 PCDH11YQ9BZA8 1340 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 IDH1O75874 414 aaKnown RBP10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 FANCCQ00597 558 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 METTL24Q5JXM2 366 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 KRT40Q6A162 431 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 GREM2Q9H772 168 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms