RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 GTF2IP78347 998 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 EXOSC10Q01780 885 aaKnown RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 GRM1Q13255 1194 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 SCARF1Q14162 830 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ANGEL2Q5VTE6 544 aaKnown RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 EYA3Q99504 573 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ABT1Q9ULW3 272 aaKnown RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 PATL2C9JE40 543 aaKnown RBP12.6□□□□□ -0.39
CDCA3-201ENST00000229265 ADORA1P30542 326 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 MCAMP43121 646 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 DEFB115Q30KQ5 88 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 CAVIN4Q5BKX8 364 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 SPATA5Q8NB90 893 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 OSBP2Q969R2 916 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 CAPNS2Q96L46 248 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 TMX4Q9H1E5 349 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-201ENST00000229265 IQSEC3Q9UPP2 1182 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-201ENST00000229265 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
CDCA3-201ENST00000229265 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 MBD3O95983 291 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
CDCA3-201ENST00000229265 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 CDCA5Q96FF9 252 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 FAM84BQ96KN1 310 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-201ENST00000229265 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 MAST3O60307 1309 aa12.59□□□□□ -0.39
CDCA3-201ENST00000229265 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 H7C1D1 291 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 WNT10BO00744 389 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 ZNF213O14771 459 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 STX6O43752 255 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
CDCA3-201ENST00000229265 ZSCAN22P10073 491 aaPredicted RBP12.58□□□□□ -0.4
CDCA3-201ENST00000229265 NCLP19338 710 aaKnown RBP12.58□□□□□ -0.4
CDCA3-201ENST00000229265 ME3Q16798 604 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 C15orf52Q6ZUT6 534 aaKnown RBP12.58□□□□□ -0.4
CDCA3-201ENST00000229265 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
CDCA3-201ENST00000229265 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 PAPPA2Q9BXP8 1791 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 CASP8AP2Q9UKL3 1982 aa12.58□□□□□ -0.4
CDCA3-201ENST00000229265 E7EWF7 191 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 F8W031 263 aaPredicted RBP12.57□□□□□ -0.4
CDCA3-201ENST00000229265 FGAP02671 866 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 IL1R1P14778 569 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
CDCA3-201ENST00000229265 LBX1P52954 281 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 HMGN5P82970 282 aaKnown RBP12.57□□□□□ -0.4
CDCA3-201ENST00000229265 TOB2Q14106 344 aaPredicted RBP12.57□□□□□ -0.4
CDCA3-201ENST00000229265 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 PODNQ7Z5L7 613 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 AGBL3Q8NEM8 1001 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 ZC3H15Q8WU90 426 aaKnown RBP12.57□□□□□ -0.4
CDCA3-201ENST00000229265 COA1Q9GZY4 146 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
CDCA3-201ENST00000229265 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 PFKFB2O60825 505 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
CDCA3-201ENST00000229265 SYT1P21579 422 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 MCM5P33992 734 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 PHKA1P46020 1223 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 TRDNQ13061 729 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 STRIP1Q5VSL9 837 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 ATL3Q6DD88 541 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 FBXO33Q7Z6M2 555 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 NCOA7Q8NI08 942 aa12.56□□□□□ -0.4
CDCA3-201ENST00000229265 PRMT6Q96LA8 375 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-201ENST00000229265 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
CDCA3-201ENST00000229265 DDX49Q9Y6V7 483 aaKnown RBP12.56□□□□□ -0.4
CDCA3-201ENST00000229265 GPAA1O43292 621 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 LETM1O95202 739 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-201ENST00000229265 GJB2P29033 226 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 BCAMP50895 628 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 LARP1BQ659C4 914 aaKnown RBP12.55□□□□□ -0.4
CDCA3-201ENST00000229265 MCTP1Q6DN14 999 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 Q6ZUG5 572 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 TDRD7Q8NHU6 1098 aaKnown RBP12.55□□□□□ -0.4
CDCA3-201ENST00000229265 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms