RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 CSF1RP07333 972 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 CPDO75976 1380 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 DEXIO95424 95 aa17.14■□□□□ 0.34
UBE2D4-201ENST00000222402 GYG1P46976 350 aa17.14■□□□□ 0.34
UBE2D4-201ENST00000222402 ANTXR2P58335 489 aa17.14■□□□□ 0.34
UBE2D4-201ENST00000222402 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.34
UBE2D4-201ENST00000222402 SYT10Q6XYQ8 523 aa17.14■□□□□ 0.34
UBE2D4-201ENST00000222402 DNAI1Q9UI46 699 aa17.14■□□□□ 0.34
UBE2D4-201ENST00000222402 USP5P45974 858 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 RILPL1Q5EBL4 403 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 ZPR1O75312 459 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 NOSTRINQ8IVI9 506 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 UBXN4Q92575 508 aa17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 CGNQ9P2M7 1197 aaKnown RBP17.14■□□□□ 0.33
UBE2D4-201ENST00000222402 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 CDC27P30260 824 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 IQCB1Q15051 598 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 ZNF654Q8IZM8 581 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 LCORLQ8N3X6 602 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 NEDD4P46934 1319 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 ZSCAN12O43309 604 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 MARCH6O60337 910 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 STX17P56962 302 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 CHRNDQ07001 517 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 MKNK2Q9HBH9 465 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 CHD2O14647 1828 aaKnown RBP17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 ANKIB1Q9P2G1 1089 aa17.13■□□□□ 0.33
UBE2D4-201ENST00000222402 RAD21O60216 631 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 CDC25BP30305 580 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 PPARAQ07869 468 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 LOC102724428A0A0B4J2F2 783 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 SIK1P57059 783 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 CRNKL1Q9BZJ0 848 aaKnown RBP17.12■□□□□ 0.33
UBE2D4-201ENST00000222402 ERVV-1B6SEH8 477 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 SARM1Q6SZW1 724 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 FANCBQ8NB91 859 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 CCDC47Q96A33 483 aaKnown RBP17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 SENP2Q9HC62 589 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 RTL9Q8NET4 1388 aa17.11■□□□□ 0.33
UBE2D4-201ENST00000222402 KRT2P35908 639 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 PDE4BQ07343 736 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 ZNF174Q15697 407 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 RBM43Q6ZSC3 357 aaKnown RBP17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 SERTAD1Q9UHV2 236 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 TNKSO95271 1327 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 G3V3G9 751 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 NR5A1Q13285 461 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 DCAF8Q5TAQ9 597 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
UBE2D4-201ENST00000222402 GNG11P61952 73 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 DHX40Q8IX18 779 aaKnown RBP17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 TFCP2L1Q9NZI6 479 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 ATP1A3P13637 1013 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 POSTNQ15063 836 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 KRBA2Q6ZNG9 492 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 FANCLQ9NW38 375 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 KCNQ4P56696 695 aa17.09■□□□□ 0.33
UBE2D4-201ENST00000222402 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.33
UBE2D4-201ENST00000222402 PPP6R2O75170 966 aa17.08■□□□□ 0.33
UBE2D4-201ENST00000222402 WDHD1O75717 1129 aaPredicted RBP17.08■□□□□ 0.33
UBE2D4-201ENST00000222402 LIFRP42702 1097 aa17.08■□□□□ 0.33
UBE2D4-201ENST00000222402 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 KAT14Q9H8E8 782 aa17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 SOS2Q07890 1332 aaPredicted RBP17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 IPO7O95373 1038 aaKnown RBP17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 IFNAR1P17181 557 aa17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 MCM9Q9NXL9 1143 aa17.08■□□□□ 0.32
UBE2D4-201ENST00000222402 STX8Q9UNK0 236 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms