RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 GOLGA8FQ08AF8 430 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 GOLGA8DPQ0D2H9 430 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 UBA7P41226 1012 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 RBM5P52756 815 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAB3D-201ENST00000222120 STIM1Q13586 685 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 RASGRF1Q13972 1273 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 KIF4BQ2VIQ3 1234 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 SMIM5Q71RC9 77 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 USP17L12C9JPN9 530 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 USP17L21D6R901 530 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 GNPATO15228 680 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 RFC4P35249 363 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 CRKLP46109 303 aaKnown RBP15.53■□□□□ 0.08
RAB3D-201ENST00000222120 NLRP12P59046 1061 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 CHRNDQ07001 517 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 SKIDA1Q1XH10 827 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 HEATR3Q7Z4Q2 680 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
RAB3D-201ENST00000222120 ZNF654Q8IZM8 581 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 CAGE1Q8TC20 777 aa15.53■□□□□ 0.08
RAB3D-201ENST00000222120 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
RAB3D-201ENST00000222120 MPHOSPH10O00566 681 aaKnown RBP15.52■□□□□ 0.08
RAB3D-201ENST00000222120 KIF23Q02241 960 aaPredicted RBP15.52■□□□□ 0.08
RAB3D-201ENST00000222120 NR5A1Q13285 461 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 SUSD4Q5VX71 490 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 LRRC8AQ8IWT6 810 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 LOC102724428A0A0B4J2F2 783 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 CASQ1P31415 396 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 SIK1P57059 783 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 LCORLQ8N3X6 602 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 CCDC94Q9BW85 323 aaPredicted RBP15.52■□□□□ 0.08
RAB3D-201ENST00000222120 TANGO6Q9C0B7 1094 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 NFE2L3Q9Y4A8 694 aa15.52■□□□□ 0.08
RAB3D-201ENST00000222120 DEXIO95424 95 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 UBE3CQ15386 1083 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 TSGA10IPQ3SY00 556 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 USPL1Q5W0Q7 1092 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 GOLGA6L1Q8N7Z2 621 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 ISCA1Q9BUE6 129 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.07
RAB3D-201ENST00000222120 SERTAD1Q9UHV2 236 aa15.52■□□□□ 0.07
RAB3D-201ENST00000222120 ZMYM6O95789 1325 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 CYB5R4Q7L1T6 521 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 POLR3GO15318 223 aaPredicted RBP15.51■□□□□ 0.07
RAB3D-201ENST00000222120 TSPY3P0CV98 308 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 TSPY8P0CW00 308 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 KRT2P35908 639 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 PPARAQ07869 468 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 PARP10Q53GL7 1025 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 RILPL1Q5EBL4 403 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 RPGRQ92834 1020 aaKnown RBP15.51■□□□□ 0.07
RAB3D-201ENST00000222120 LZTFL1Q9NQ48 299 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 COBLO75128 1261 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 PIK3AP1Q6ZUJ8 805 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 GRAMD1CQ8IYS0 662 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 CCDC12Q8WUD4 166 aaPredicted RBP15.51■□□□□ 0.07
RAB3D-201ENST00000222120 SAP30BPQ9UHR5 308 aaKnown RBP15.51■□□□□ 0.07
RAB3D-201ENST00000222120 PCDHA5Q9Y5H7 936 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 KIF5BP33176 963 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 CCT6AP40227 531 aaKnown RBP15.51■□□□□ 0.07
RAB3D-201ENST00000222120 TERF1P54274 439 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 FANCLQ9NW38 375 aa15.51■□□□□ 0.07
RAB3D-201ENST00000222120 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
RAB3D-201ENST00000222120 TNKSO95271 1327 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 CMA1P23946 247 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 DYNLL1P63167 89 aaKnown RBP15.5■□□□□ 0.07
RAB3D-201ENST00000222120 TMCO3Q6UWJ1 677 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 SLU7O95391 586 aaKnown RBP15.5■□□□□ 0.07
RAB3D-201ENST00000222120 CTDNEP1O95476 244 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 IDEP14735 1019 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 CCDC144BQ3MJ40 725 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 FANCBQ8NB91 859 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 MEGF6O75095 1541 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 CUTAO60888 179 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
RAB3D-201ENST00000222120 KANK3Q6NY19 840 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
RAB3D-201ENST00000222120 ZNHIT6Q9NWK9 470 aaKnown RBP15.5■□□□□ 0.07
RAB3D-201ENST00000222120 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
RAB3D-201ENST00000222120 ATP1A3P13637 1013 aa15.49■□□□□ 0.07
RAB3D-201ENST00000222120 SMARCC2Q8TAQ2 1214 aa15.49■□□□□ 0.07
RAB3D-201ENST00000222120 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 KRT18P05783 430 aaKnown RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 GPS2Q13227 327 aa15.49■□□□□ 0.07
RAB3D-201ENST00000222120 SLC39A14Q15043 492 aa15.49■□□□□ 0.07
RAB3D-201ENST00000222120 ENOX2Q16206 610 aaKnown RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 KDM6AO15550 1401 aaPredicted RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
RAB3D-201ENST00000222120 CCDC66A2RUB6 948 aa15.48■□□□□ 0.07
RAB3D-201ENST00000222120 AP5Z1O43299 807 aa15.48■□□□□ 0.07
RAB3D-201ENST00000222120 IL6STP40189 918 aaPredicted RBP15.48■□□□□ 0.07
RAB3D-201ENST00000222120 PICALMQ13492 652 aa15.48■□□□□ 0.07
RAB3D-201ENST00000222120 NOC3LQ8WTT2 800 aaKnown RBP15.48■□□□□ 0.07
RAB3D-201ENST00000222120 CDC27P30260 824 aa15.48■□□□□ 0.07
RAB3D-201ENST00000222120 ADKP55263 362 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms