RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ZSWIM5Q9P217 1185 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 ERICH2A1L162 156 aa24.35■■□□□ 1.49
CCDC130-201ENST00000221554 SMTNL1A8MU46 457 aa24.35■■□□□ 1.49
CCDC130-201ENST00000221554 KIF28PB7ZC32 967 aa24.35■■□□□ 1.49
CCDC130-201ENST00000221554 AXDND1Q5T1B0 1012 aaPredicted RBP24.35■■□□□ 1.49
CCDC130-201ENST00000221554 VPS37DQ86XT2 251 aa24.35■■□□□ 1.49
CCDC130-201ENST00000221554 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.35■■□□□ 1.49
CCDC130-201ENST00000221554 NIP7Q9Y221 180 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCDC130-201ENST00000221554 KAT6BQ8WYB5 2073 aa24.35■■□□□ 1.49
CCDC130-201ENST00000221554 FAM237AA0A1B0GTK4 181 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 FMNL1O95466 1100 aaPredicted RBP24.34■■□□□ 1.49
CCDC130-201ENST00000221554 IFNAR1P17181 557 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 EPB41L4AQ9HCS5 686 aaPredicted RBP24.34■■□□□ 1.49
CCDC130-201ENST00000221554 MYO5AQ9Y4I1 1855 aaKnown RBP24.34■■□□□ 1.49
CCDC130-201ENST00000221554 THSD7AQ9UPZ6 1657 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 CDC27P30260 824 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 TDO2P48775 406 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 NLRP12P59046 1061 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 SAFBQ15424 915 aaKnown RBP eCLIP24.34■■□□□ 1.49
CCDC130-201ENST00000221554 FAM98CQ17RN3 349 aaKnown RBP24.34■■□□□ 1.49
CCDC130-201ENST00000221554 MICU3Q86XE3 530 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 TRIM22Q8IYM9 498 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 ARMT1Q9H993 441 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 SEC31BQ9NQW1 1179 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 SLC4A4Q9Y6R1 1079 aa24.34■■□□□ 1.49
CCDC130-201ENST00000221554 GSDMDP57764 484 aa24.33■■□□□ 1.49
CCDC130-201ENST00000221554 BARGINQ6ZT62 677 aa24.33■■□□□ 1.49
CCDC130-201ENST00000221554 ELOA2Q8IYF1 753 aaPredicted RBP24.33■■□□□ 1.49
CCDC130-201ENST00000221554 LRP2BPQ9P2M1 347 aa24.33■■□□□ 1.49
CCDC130-201ENST00000221554 IMPACTQ9P2X3 320 aa24.33■■□□□ 1.49
CCDC130-201ENST00000221554 CHRNDQ07001 517 aa24.32■■□□□ 1.48
CCDC130-201ENST00000221554 RAB11FIP4Q86YS3 637 aa24.32■■□□□ 1.48
CCDC130-201ENST00000221554 C17orf53Q8N3J3 647 aaPredicted RBP24.32■■□□□ 1.48
CCDC130-201ENST00000221554 CUTAO60888 179 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 PFKFB1P16118 471 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 UBE4AQ14139 1066 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 NOL10Q9BSC4 688 aaKnown RBP24.31■■□□□ 1.48
CCDC130-201ENST00000221554 FAM217BQ9NTX9 383 aaPredicted RBP24.31■■□□□ 1.48
CCDC130-201ENST00000221554 SYKP43405 635 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 WTAPQ15007 396 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 AOPEPQ8N6M6 819 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.31■■□□□ 1.48
CCDC130-201ENST00000221554 NRBP1Q9UHY1 535 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 ANAPC4Q9UJX5 808 aa24.31■■□□□ 1.48
CCDC130-201ENST00000221554 ZNF831Q5JPB2 1677 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 CHD4Q14839 1912 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 BCAMP50895 628 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 CTDSPL2Q05D32 466 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 LRRC8AQ8IWT6 810 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 FAM13BQ9NYF5 915 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 DENND2AQ9ULE3 1009 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 HPSEQ9Y251 543 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 ZNF804BA4D1E1 1349 aa24.3■■□□□ 1.48
CCDC130-201ENST00000221554 MYO1BO43795 1136 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 PCP11498 1178 aaKnown RBP24.29■■□□□ 1.48
CCDC130-201ENST00000221554 RXRBP28702 533 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 PTPAQ15257 358 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 SF3B3Q15393 1217 aaKnown RBP24.29■■□□□ 1.48
CCDC130-201ENST00000221554 MARCH10Q8NA82 808 aaPredicted RBP24.29■■□□□ 1.48
CCDC130-201ENST00000221554 PHKBQ93100 1093 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 BCORQ6W2J9 1755 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 FAM177BA6PVY3 158 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 IKBKBO14920 756 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 ITPK1Q13572 414 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 RTN1Q16799 776 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 TMED8Q6PL24 325 aaPredicted RBP24.29■■□□□ 1.48
CCDC130-201ENST00000221554 ANKRD18AQ8IVF6 992 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 CACTINQ8WUQ7 758 aaKnown RBP24.29■■□□□ 1.48
CCDC130-201ENST00000221554 MAP3K14Q99558 947 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 SLC26A6Q9BXS9 759 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 GJB4Q9NTQ9 266 aa24.29■■□□□ 1.48
CCDC130-201ENST00000221554 HOOK1Q9UJC3 728 aaKnown RBP24.29■■□□□ 1.48
CCDC130-201ENST00000221554 DEXIO95424 95 aa24.28■■□□□ 1.48
CCDC130-201ENST00000221554 LCORLQ8N3X6 602 aa24.28■■□□□ 1.48
CCDC130-201ENST00000221554 FOXP1Q9H334 677 aaPredicted RBP24.28■■□□□ 1.48
CCDC130-201ENST00000221554 PAXBP1Q9Y5B6 917 aa24.28■■□□□ 1.48
CCDC130-201ENST00000221554 RANBP6O60518 1105 aaKnown RBP24.27■■□□□ 1.48
CCDC130-201ENST00000221554 CYP7A1P22680 504 aa24.27■■□□□ 1.48
CCDC130-201ENST00000221554 CAVIN4Q5BKX8 364 aa24.27■■□□□ 1.48
CCDC130-201ENST00000221554 RESP18Q5W5W9 173 aa24.27■■□□□ 1.48
CCDC130-201ENST00000221554 BSDC1Q9NW68 430 aaPredicted RBP24.27■■□□□ 1.48
CCDC130-201ENST00000221554 TUBE1Q9UJT0 475 aa24.27■■□□□ 1.48
CCDC130-201ENST00000221554 ONECUT3O60422 494 aaPredicted RBP24.26■■□□□ 1.47
CCDC130-201ENST00000221554 WDHD1O75717 1129 aaPredicted RBP24.26■■□□□ 1.47
CCDC130-201ENST00000221554 NOSTRINQ8IVI9 506 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 ESR2Q92731 530 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 ACSBG1Q96GR2 724 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 AIFM3Q96NN9 605 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 SENP2Q9HC62 589 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 MAGEB6P1A0A0J9YX57 407 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 SEMA3EO15041 775 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 MMP1P03956 469 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 RXRAP19793 462 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 RBM10P98175 930 aaKnown RBP24.26■■□□□ 1.47
CCDC130-201ENST00000221554 PPARAQ07869 468 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 LRMPQ12912 555 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 RILPL1Q5EBL4 403 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 UBAC1Q9BSL1 405 aa24.26■■□□□ 1.47
CCDC130-201ENST00000221554 OSBPL5Q9H0X9 879 aaPredicted RBP24.26■■□□□ 1.47
CCDC130-201ENST00000221554 KCND1Q9NSA2 647 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms