RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 IFNKQ9P0W0 207 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PNMA2Q9UL42 364 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 NCAPD2Q15021 1401 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 KDM3AQ9Y4C1 1321 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 MAGI3Q5TCQ9 1506 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA6CA6NDK9 693 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA8KD6RF30 607 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA6DP0CG33 693 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 ABCD1P33897 745 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 MAP3K21Q5TCX8 1036 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PHLDB2Q86SQ0 1253 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 SLC17A8Q8NDX2 589 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PIK3R5Q8WYR1 880 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 RUBCNQ92622 972 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CCDC114Q96M63 670 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 THUMPD2Q9BTF0 503 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA6AQ9NYA3 693 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 TFIP11Q9UBB9 837 aaKnown RBP4.95□□□□□ -1.62
CHD9-201ENST00000219084 MAGEB6P1A0A0J9YX57 407 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 SGSM2O43147 1006 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 SLC8A1P32418 973 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 ANO1Q5XXA6 986 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PPP1R2P3Q6NXS1 205 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 TRIM58Q8NG06 486 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 SH2D4AQ9H788 454 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 PPLO60437 1756 aa4.95□□□□□ -1.62
CHD9-201ENST00000219084 CPSF1Q10570 1443 aaKnown RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 KDM6BO15054 1643 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 DKC1O60832 514 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHD9-201ENST00000219084 PTGS1P23219 599 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 EVCP57679 992 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 SPDYE3A6NKU9 549 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 FLOT1O75955 427 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 TRPC3Q13507 836 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 CFAP157Q5JU67 520 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 CCDC122Q5T0U0 273 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 SV2BQ7L1I2 683 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 WAPLQ7Z5K2 1190 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PPFIBP2Q8ND30 876 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 UBA5Q9GZZ9 404 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PRDM10Q9NQV6 1147 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 MIS18AQ9NYP9 233 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 ZRANB1Q9UGI0 708 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PHLPP2Q6ZVD8 1323 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PABPN1LA6NDY0 278 aaKnown RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 GAS8O95995 478 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PRPF4BQ13523 1007 aaKnown RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 UBE4AQ14139 1066 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 SEPT6Q14141 434 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 TCERG1LQ5VWI1 586 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 MPRIPQ6WCQ1 1025 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 STMN2Q93045 179 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 FAM114A2Q9NRY5 505 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 MAST3O60307 1309 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PSDA5PKW4 1024 aaPredicted RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA6BA6NDN3 693 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 LAD1O00515 517 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 SEMA3FQ13275 785 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 C8orf74Q6P047 294 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 IGSF22Q8N9C0 903 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 ZNF526Q8TF50 670 aaPredicted RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 ZNF274Q96GC6 653 aaPredicted RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 CUEDC2Q9H467 287 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 MROH5Q6ZUA9 1318 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PTCH1Q13635 1447 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 SPDYE4A6NLX3 237 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 EIF4A2Q14240 407 aaKnown RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 GRIPAP1Q4V328 841 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 GOLGA5Q8TBA6 731 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 FAM71BQ8TC56 605 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 VTI1AQ96AJ9 217 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 TACO1Q9BSH4 297 aaKnown RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 UTP14AQ9BVJ6 771 aaKnown RBP4.94□□□□□ -1.62
CHD9-201ENST00000219084 KCNH3Q9ULD8 1083 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 EXOC7Q9UPT5 735 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 TCHHQ07283 1943 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 ERBB4Q15303 1308 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 RFX7Q2KHR2 1363 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 IDEP14735 1019 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 NAPAP54920 295 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 PAK1Q13153 545 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 ZNF569Q5MCW4 686 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 GDPD2Q9HCC8 539 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 POLKQ9UBT6 870 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 DENND2AQ9ULE3 1009 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 SLC4A4Q9Y6R1 1079 aa4.94□□□□□ -1.62
CHD9-201ENST00000219084 MAN1A1P33908 653 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 CPLX3Q8WVH0 158 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 GTF3C6Q969F1 213 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.93□□□□□ -1.62
CHD9-201ENST00000219084 ABCA6Q8N139 1617 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 EIF3CLB5ME19 914 aaKnown RBP4.93□□□□□ -1.62
CHD9-201ENST00000219084 BRD1O95696 1058 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 PDE6BP35913 854 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 SLC9C1Q4G0N8 1177 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 NBPF6Q5VWK0 638 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 ADALQ6DHV7 355 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 ATRIPQ8WXE1 791 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 NBPF4Q96M43 638 aa4.93□□□□□ -1.62
CHD9-201ENST00000219084 EIF3CQ99613 913 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms