RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 FDPSP14324 419 aaKnown RBP20.34■□□□□ 0.85
VRK1-201ENST00000216639 NPR1P16066 1061 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 WTAPQ15007 396 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 TBC1D16Q8TBP0 767 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 SPATA32Q96LK8 384 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 JAG2Q9Y219 1238 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 KIAA1551Q9HCM1 1747 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.85
VRK1-201ENST00000216639 GOLGA8AA7E2F4 631 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 BAG3O95817 575 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 IL1R1P14778 569 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 ALDH1B1P30837 517 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 ATL3Q6DD88 541 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 CERS3Q8IU89 383 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 NKX2-3Q8TAU0 364 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 C8orf76Q96K31 380 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.85
VRK1-201ENST00000216639 ARPP21Q9UBL0 812 aaPredicted RBP20.33■□□□□ 0.85
VRK1-201ENST00000216639 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 TACC3Q9Y6A5 838 aa20.33■□□□□ 0.85
VRK1-201ENST00000216639 C6orf229H3BNL8 230 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 LETM1O95202 739 aaPredicted RBP20.33■□□□□ 0.84
VRK1-201ENST00000216639 MMP10P09238 476 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 FAM173BQ6P4H8 233 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 CTR9Q6PD62 1173 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 LRSAM1Q6UWE0 723 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 MICU3Q86XE3 530 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 RAB11FIP4Q86YS3 637 aa20.33■□□□□ 0.84
VRK1-201ENST00000216639 LRRC37AA6NMS7 1700 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 SYCE3A1L190 88 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 GOLGA6L4A6NEF3 574 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 SRGNP10124 158 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 FOSBP53539 338 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 RCAN1P53805 252 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 CCDC183Q5T5S1 534 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 TTC6Q86TZ1 520 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
VRK1-201ENST00000216639 ZNF396Q96N95 335 aaPredicted RBP20.32■□□□□ 0.84
VRK1-201ENST00000216639 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
VRK1-201ENST00000216639 DCP1AQ9NPI6 582 aaPredicted RBP20.32■□□□□ 0.84
VRK1-201ENST00000216639 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 USP17L21D6R901 530 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 STK11IPQ8N1F8 1099 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 TBC1D22AQ8WUA7 517 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
VRK1-201ENST00000216639 FGRP09769 529 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 SBK1Q52WX2 424 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 SENP2Q9HC62 589 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 TFIP11Q9UBB9 837 aaKnown RBP20.3■□□□□ 0.84
VRK1-201ENST00000216639 NID2Q14112 1375 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 CCDC196A0A1B0GTZ2 297 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 PPFIA3O75145 1194 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
VRK1-201ENST00000216639 NT5C2P49902 561 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 IQCA1Q86XH1 822 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 SLF2Q8IX21 1173 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 FBXO18Q8NFZ0 1043 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 LEO1Q8WVC0 666 aaPredicted RBP20.3■□□□□ 0.84
VRK1-201ENST00000216639 MASTLQ96GX5 879 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 ZKSCAN3Q9BRR0 538 aa20.3■□□□□ 0.84
VRK1-201ENST00000216639 EP400Q96L91 3159 aa20.29■□□□□ 0.84
VRK1-201ENST00000216639 IARSP41252 1262 aaKnown RBP20.29■□□□□ 0.84
VRK1-201ENST00000216639 PPP4CP60510 307 aa20.29■□□□□ 0.84
VRK1-201ENST00000216639 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
VRK1-201ENST00000216639 RXRAP19793 462 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 USP5P45974 858 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 PDE4BQ07343 736 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 PPP2R5BQ15173 497 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 WASF1Q92558 559 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 TNKSO95271 1327 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 STK36Q9NRP7 1315 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 BAZ2AQ9UIF9 1905 aaKnown RBP20.28■□□□□ 0.84
VRK1-201ENST00000216639 LAMB1P07942 1786 aa20.28■□□□□ 0.84
VRK1-201ENST00000216639 ORC4O43929 436 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
VRK1-201ENST00000216639 CDC27P30260 824 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 RTN1Q16799 776 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 TPRNQ4KMQ1 711 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 CCDC144CPQ8IYA2 1237 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 MPNDQ8N594 471 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
VRK1-201ENST00000216639 ZSCAN10Q96SZ4 725 aaPredicted RBP20.27■□□□□ 0.84
VRK1-201ENST00000216639 COA1Q9GZY4 146 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 LTBP1Q14766 1721 aa20.27■□□□□ 0.84
VRK1-201ENST00000216639 CYP2D7A0A087X1C5 515 aa20.27■□□□□ 0.83
VRK1-201ENST00000216639 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.83
VRK1-201ENST00000216639 SSRP1Q08945 709 aaKnown RBP20.27■□□□□ 0.83
VRK1-201ENST00000216639 BRAPQ7Z569 592 aa20.27■□□□□ 0.83
VRK1-201ENST00000216639 ALG1Q9BT22 464 aa20.27■□□□□ 0.83
VRK1-201ENST00000216639 MYL10Q9BUA6 226 aa20.27■□□□□ 0.83
VRK1-201ENST00000216639 MCM9Q9NXL9 1143 aa20.27■□□□□ 0.83
VRK1-201ENST00000216639 PLCG2P16885 1265 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 TRIM29Q14134 588 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 SEC23AQ15436 765 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 MFSD14BQ5SR56 506 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 TRIM22Q8IYM9 498 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms