RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 AK2P54819 239 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 TRDNQ13061 729 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 AKNAD1Q5T1N1 836 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 CDC42EP5Q6NZY7 148 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 STAG1Q8WVM7 1258 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 HDAC9Q9UKV0 1011 aa18.89■□□□□ 0.61
SNRPD3-201ENST00000215829 EIF6P56537 245 aaKnown RBP18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 MFSD6Q6ZSS7 791 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 MAPKAPK5Q8IW41 473 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 OGFOD1Q8N543 542 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 TIAM2Q8IVF5 1701 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 CYP2D7A0A087X1C5 515 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 USP17L8P0C7I0 530 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 CFAP100Q494V2 611 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 RALYLQ86SE5 291 aaKnown RBP18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 MB21D2Q8IYB1 491 aaPredicted RBP18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 TCEANC2Q96MN5 208 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 PCDHAC2Q9Y5I4 1007 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 FLT1P17948 1338 aa18.88■□□□□ 0.61
SNRPD3-201ENST00000215829 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
SNRPD3-201ENST00000215829 ANKRD1Q15327 319 aa18.87■□□□□ 0.61
SNRPD3-201ENST00000215829 CNNM2Q9H8M5 875 aa18.87■□□□□ 0.61
SNRPD3-201ENST00000215829 INCENPQ9NQS7 918 aa18.87■□□□□ 0.61
SNRPD3-201ENST00000215829 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
SNRPD3-201ENST00000215829 FOCADQ5VW36 1801 aa18.87■□□□□ 0.61
SNRPD3-201ENST00000215829 DICER1Q9UPY3 1922 aaKnown RBP18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 SBF1O95248 1867 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 RPS12P25398 132 aaKnown RBP18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 MCM5P33992 734 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 MMP14P50281 582 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 C12orf60Q5U649 245 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 AMOTL1Q8IY63 956 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 KRT23Q9C075 422 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 LIMCH1Q9UPQ0 1083 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 NAV1Q8NEY1 1877 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 NEDD4P46934 1319 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 SMIM22K7EJ46 135 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 FGRP09769 529 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 CYP2D6P10635 497 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 PCP11498 1178 aaKnown RBP18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 TMX3Q96JJ7 454 aa18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 PRMT6Q96LA8 375 aaPredicted RBP18.86■□□□□ 0.61
SNRPD3-201ENST00000215829 ECM29Q5VYK3 1845 aa18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 LAMB1P07942 1786 aa18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 WDR19Q8NEZ3 1342 aa18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 TOB2Q14106 344 aaPredicted RBP18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 Q6ZUG5 572 aa18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 NOL8Q76FK4 1167 aaKnown RBP18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 FBXL16Q8N461 479 aa18.85■□□□□ 0.61
SNRPD3-201ENST00000215829 B4E1Z4 1266 aa18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 DLGAP5Q15398 846 aa18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 STK11IPQ8N1F8 1099 aa18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 MTMR14Q8NCE2 650 aa18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 IDI2Q9BXS1 227 aa18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 DDX4Q9NQI0 724 aaKnown RBP18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 SAP30BPQ9UHR5 308 aaKnown RBP18.84■□□□□ 0.61
SNRPD3-201ENST00000215829 SPDYE2BA6NHP3 402 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 PRC1O43663 620 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 SPDYE6P0CI01 402 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 ANTXR2P58335 489 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 EVX2Q03828 476 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 PICALMQ13492 652 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 NKX2-3Q8TAU0 364 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 DPF2Q92785 391 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 LRRC2Q9BYS8 371 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 MYH1P12882 1939 aa18.83■□□□□ 0.61
SNRPD3-201ENST00000215829 ZNF541Q9H0D2 1346 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 PLCD1P51178 756 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 FGD1P98174 961 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 CYB5R4Q7L1T6 521 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 ZSCAN31Q96LW9 406 aaPredicted RBP18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 TDRD3Q9H7E2 651 aaKnown RBP18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 TOMM22Q9NS69 142 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 ZSWIM5Q9P217 1185 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
SNRPD3-201ENST00000215829 ROBO3Q96MS0 1386 aa18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 KDM4AO75164 1064 aa18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 ZNF280AP59817 542 aaPredicted RBP18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 PDE4BQ07343 736 aa18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 NFIAQ12857 509 aa18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 RRP12Q5JTH9 1297 aaKnown RBP18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 OSBPL5Q9H0X9 879 aaPredicted RBP18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
SNRPD3-201ENST00000215829 ORC4O43929 436 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 GMPSP49915 693 aaPredicted RBP18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 CUL4AQ13619 759 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 ESR2Q92731 530 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 UTRNP46939 3433 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms