RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 OTUD6BQ8N6M0 293 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 SPTLC3Q9NUV7 552 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 LAMC1P11047 1609 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 LARGE1O95461 756 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 CAVIN4Q5BKX8 364 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 HNRNPH2P55795 449 aaKnown RBP13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 MTX1Q13505 466 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 CACNA2D4Q7Z3S7 1137 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 TRIM21P19474 475 aaKnown RBP13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 MTIF2P46199 727 aaKnown RBP13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 SPECC1Q5M775 1068 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 C2CD5Q86YS7 1000 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 DHX58Q96C10 678 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 KIF24Q5T7B8 1368 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 ZBTB43O43298 467 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 CEP57Q86XR8 500 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 CCDC113Q9H0I3 377 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 AKR1B15C9JRZ8 316 aaPredicted RBP13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 CKAP4Q07065 602 aaKnown RBP13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 RRAGBQ5VZM2 374 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 AKAP2Q9Y2D5 859 aa13.09□□□□□ -0.31
DNMT3B-201ENST00000201963 AKR1B10O60218 316 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 HSF2BPO75031 334 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 SERPINB2P05120 415 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 BRAPQ7Z569 592 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 SPON1Q9HCB6 807 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 ELP1O95163 1332 aa13.08□□□□□ -0.31
DNMT3B-201ENST00000201963 PPLO60437 1756 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 DESI2Q9BSY9 194 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 CLCN6P51797 869 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 SYCP1Q15431 976 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 AFAP1L1Q8TED9 768 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 GDAP1L1Q96MZ0 367 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 IQSEC2Q5JU85 1478 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 IFFO1Q0D2I5 559 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 ANO1Q5XXA6 986 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
DNMT3B-201ENST00000201963 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 NLRP12P59046 1061 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 IGSF22Q8N9C0 903 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 TUBBP07437 444 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 EFCAB8A8MWE9 144 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 NF2P35240 595 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 DDIT3P35638 169 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 ZFYVE27Q5T4F4 411 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 EHBP1Q8NDI1 1231 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
DNMT3B-201ENST00000201963 CCT6AP40227 531 aaKnown RBP13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 TUBB4BP68371 445 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 KMT5BQ4FZB7 885 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 PPP1R13BQ96KQ4 1090 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 ALS2CR12Q96Q35 445 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 CYLC1P35663 651 aaPredicted RBP13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 TFCP2Q12800 502 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 LLPHQ9BRT6 129 aaKnown RBP13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 NAA16Q6N069 864 aaPredicted RBP13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 CCDC91Q7Z6B0 441 aa13.06□□□□□ -0.32
DNMT3B-201ENST00000201963 MYO1BO43795 1136 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 PNMA6AP0CW24 399 aaPredicted RBP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 SPAG1Q07617 926 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 PTPN21Q16825 1174 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 DYDC1Q8WWB3 177 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 ZNF408Q9H9D4 720 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 OPA1O60313 960 aa13.05□□□□□ -0.32
DNMT3B-201ENST00000201963 RANBP6O60518 1105 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms