RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 KCTD19Q17RG1 926 aaPredicted RBP6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 NBPF14Q5TI25 921 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 KLHL10Q6JEL2 608 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 RAD9BQ6WBX8 426 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 CCDC12Q8WUD4 166 aaPredicted RBP6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 ZNF274Q96GC6 653 aaPredicted RBP6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 CDC5LQ99459 802 aaKnown RBP6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 ZKSCAN3Q9BRR0 538 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 RABEP2Q9H5N1 569 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 ANKZF1Q9H8Y5 726 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 VPS18Q9P253 973 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 SLAIN2Q9P270 581 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 RSPH14Q9UHP6 348 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 TACC3Q9Y6A5 838 aa6.71□□□□□ -1.34
CEACAM1-201ENST00000161559 SIPA1L3O60292 1781 aaPredicted RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 EFCAB8A8MWE9 144 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 CASQ1P31415 396 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 LONRF2Q1L5Z9 754 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 KRT40Q6A162 431 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 RSRC2Q7L4I2 434 aaKnown RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 MB21D2Q8IYB1 491 aaPredicted RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 KCNG4Q8TDN1 519 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 MAP3K14Q99558 947 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 ALG1Q9BT22 464 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 TRIM10Q9UDY6 481 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 NFE2L3Q9Y4A8 694 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 TMEM94Q12767 1356 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 B4E1Z4 1266 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 WNT7AO00755 349 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 RNF113AO15541 343 aaKnown RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 A1BGP04217 495 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 CMA1P23946 247 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 NR5A1Q13285 461 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 RABL6Q3YEC7 729 aaPredicted RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 SLC9C2Q5TAH2 1124 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 GPIHBP1Q8IV16 184 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 KLHL34Q8N239 644 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 RGS22Q8NE09 1264 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 ACRBPQ8NEB7 543 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 BPIFA3Q9BQP9 254 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 DSCC1Q9BVC3 393 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 C4AP0C0L4 1744 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 C4BP0C0L5 1744 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 MYO1CO00159 1063 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 POLR2DO15514 142 aaKnown RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 SLC39A14Q15043 492 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 CHRNA2Q15822 529 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 CCDC158Q5M9N0 1113 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 RIN2Q8WYP3 895 aaPredicted RBP6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 SLC52A2Q9HAB3 445 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 NLRP2Q9NX02 1062 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 TUBE1Q9UJT0 475 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 HPSEQ9Y251 543 aa6.7□□□□□ -1.34
CEACAM1-201ENST00000161559 ARFGEF2Q9Y6D5 1785 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 A0A087X0B3 334 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 BTBD18B2RXH4 712 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 KIF2AO00139 706 aaPredicted RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 ZMYND10O75800 440 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 CD44P16070 742 aaKnown RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 TOB1P50616 345 aaPredicted RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 MRPS25P82663 173 aaKnown RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 ARHGEF25Q86VW2 580 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 CNNM3Q8NE01 707 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 EEF2KMTQ96G04 330 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 MAN1B1Q9UKM7 699 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 FAN1Q9Y2M0 1017 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 YEATS4O95619 227 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 HMGB1P09429 215 aaKnown RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 PDIA4P13667 645 aaKnown RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 TBX2Q13207 712 aaPredicted RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 KRT28Q7Z3Y7 464 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 CREBRFQ8IUR6 639 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 NOA1Q8NC60 698 aaKnown RBP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 OXER1Q8TDS5 423 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 ABCB6Q9NP58 842 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 ARFGAP3Q9NP61 516 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 ATG3Q9NT62 314 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 KCNH3Q9ULD8 1083 aa6.69□□□□□ -1.34
CEACAM1-201ENST00000161559 CYP27B1O15528 508 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 GPAA1O43292 621 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 VSNL1P62760 191 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 PPARDQ03181 441 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 RBL2Q08999 1139 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 DPYDQ12882 1025 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 NCAPH2Q6IBW4 605 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 CERKQ8TCT0 537 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 SHISA4Q96DD7 197 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 RNF39Q9H2S5 420 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 POLD4Q9HCU8 107 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 HELLSQ9NRZ9 838 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 FAM217BQ9NTX9 383 aaPredicted RBP6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 ARGLU1Q9NWB6 273 aaPredicted RBP6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 PCDHB6Q9Y5E3 794 aa6.68□□□□□ -1.34
CEACAM1-201ENST00000161559 UBN2Q6ZU65 1347 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms