RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 SMIM5Q71RC9 77 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 FOXP4Q8IVH2 680 aaPredicted RBP9.55□□□□□ -0.88
CDC27-201ENST00000066544 JMYQ8N9B5 988 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 KCNH3Q9ULD8 1083 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 CYP2D7A0A087X1C5 515 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 SUSD4Q5VX71 490 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 VGLL2Q8N8G2 317 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 ZBTB9Q96C00 473 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC27-201ENST00000066544 KCNQ4P56696 695 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
CDC27-201ENST00000066544 LRRN4CLQ8ND94 238 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 SLC5A1P13866 664 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 CDK11BP21127 795 aaKnown RBP9.55□□□□□ -0.88
CDC27-201ENST00000066544 GSDMDP57764 484 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC27-201ENST00000066544 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 OLFM4Q6UX06 510 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 LPIN2Q92539 896 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 RAI14Q9P0K7 980 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 DNAI1Q9UI46 699 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 ZNF142P52746 1687 aaPredicted RBP9.55□□□□□ -0.88
CDC27-201ENST00000066544 FAM205CA6NFA0 338 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 NRDCO43847 1150 aa9.55□□□□□ -0.88
CDC27-201ENST00000066544 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
CDC27-201ENST00000066544 CASP1P29466 404 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 PDE4BQ07343 736 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 WTAPQ15007 396 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 PTPAQ15257 358 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 RTN1Q16799 776 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 BICDL1Q6ZP65 573 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 METTL16Q86W50 562 aaKnown RBP9.54□□□□□ -0.88
CDC27-201ENST00000066544 CREBRFQ8IUR6 639 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 UTP14AQ9BVJ6 771 aaKnown RBP9.54□□□□□ -0.88
CDC27-201ENST00000066544 PLA2G12BQ9BX93 195 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 JAG2Q9Y219 1238 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 NTRK3Q16288 839 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 AKNAD1Q5T1N1 836 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 NYAP1Q6ZVC0 841 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 COBLO75128 1261 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 MYL5Q02045 173 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 STAMQ92783 540 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 ERICH2A1L162 156 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 EXOC5O00471 708 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 PPP1R13BQ96KQ4 1090 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 CABP5Q9NP86 173 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 SERTAD1Q9UHV2 236 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 PCDHB6Q9Y5E3 794 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 GLI3P10071 1580 aa9.54□□□□□ -0.88
CDC27-201ENST00000066544 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 ADAMTS2O95450 1211 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 CYP7A1P22680 504 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 STX17P56962 302 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 ZSCAN20P17040 1043 aaPredicted RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 AFMP43652 599 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 GYG1P46976 350 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 UBAC1Q9BSL1 405 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 TCRBV5S4A2TA0A5A2 114 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 TOP1P11387 765 aaKnown RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 FBXL16Q8N461 479 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 VPS54Q9P1Q0 977 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 NIP7Q9Y221 180 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDC27-201ENST00000066544 KRBA2Q6ZNG9 492 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 NACAP1Q9BZK3 213 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 OSBPL5Q9H0X9 879 aaPredicted RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
CDC27-201ENST00000066544 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
CDC27-201ENST00000066544 URI1O94763 535 aaPredicted RBP9.52□□□□□ -0.88
CDC27-201ENST00000066544 BMP6P22004 513 aa9.52□□□□□ -0.88
CDC27-201ENST00000066544 SART3Q15020 963 aaKnown RBP9.52□□□□□ -0.88
CDC27-201ENST00000066544 CCDC150Q8NCX0 1101 aa9.52□□□□□ -0.88
CDC27-201ENST00000066544 CPLX3Q8WVH0 158 aa9.52□□□□□ -0.88
CDC27-201ENST00000066544 ADAMTSL3P82987 1691 aa9.52□□□□□ -0.88
CDC27-201ENST00000066544 TJP1Q07157 1748 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 CDHR2Q9BYE9 1310 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 SLU7O95391 586 aaKnown RBP9.52□□□□□ -0.89
CDC27-201ENST00000066544 KMT5BQ4FZB7 885 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 MAP3K14Q99558 947 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 HSD3B7Q9H2F3 369 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 NWD2Q9ULI1 1742 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 TOB1P50616 345 aaPredicted RBP9.52□□□□□ -0.89
CDC27-201ENST00000066544 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
CDC27-201ENST00000066544 AKAP17AQ02040 695 aaKnown RBP9.52□□□□□ -0.89
CDC27-201ENST00000066544 FBXO38Q6PIJ6 1188 aa9.52□□□□□ -0.89
CDC27-201ENST00000066544 DHX58Q96C10 678 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms