RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 HelbQ6NVF4 1074 aa28.52■■■□□ 2.16
Pcf11-205ENSMUST00000208255 Tgm5Q9D7I9 724 aa28.52■■■□□ 2.16
Pcf11-205ENSMUST00000208255 Zbtb43Q9DAI4 467 aa28.52■■■□□ 2.16
Pcf11-205ENSMUST00000208255 Cnot7Q60809 285 aa28.52■■■□□ 2.16
Pcf11-205ENSMUST00000208255 Zkscan1Q8BGS3 561 aaKnown RBP28.52■■■□□ 2.16
Pcf11-205ENSMUST00000208255 Tubb6Q922F4 447 aa28.52■■■□□ 2.16
Pcf11-205ENSMUST00000208255 Peak1Q69Z38 1735 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Med23Q80YQ2 1367 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ces1aE9PYP1 563 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Wnt10bP48614 389 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Spata5Q3UMC0 893 aaKnown RBP28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Mum1l1Q4VA55 681 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ctr9Q62018 1173 aaKnown RBP28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ascc2Q91WR3 749 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Bap1Q99PU7 728 aa28.51■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Lins1Q3U1D0 764 aa28.5■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Tigd5Q499M4 642 aa28.5■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Trappc12Q8K2L8 797 aa28.5■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Lamb1P02469 1786 aa28.5■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Znf638Q61464 1960 aaKnown RBP28.5■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Lipo1J3QME6 396 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ccdc174Q3U155 467 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Gxylt1Q3UHH8 404 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Krt84Q99M73 603 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Zbed3Q9D0L1 228 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Znf326O88291 580 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 DnttP09838 530 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Pde11aP0C1Q2 933 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 GnptabQ69ZN6 1235 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ppp1r10Q80W00 888 aaKnown RBP28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ttc12Q8BW49 704 aa28.49■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ncbp1Q3UYV9 790 aaKnown RBP28.48■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ccdc39Q9D5Y1 937 aa28.48■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Rai14Q9EP71 979 aaKnown RBP28.48■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Odf2lQ9D478 642 aa28.47■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Gdpd2Q9ESM6 539 aa28.47■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Lbhd1A0A087WPA0 259 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 CnpP16330 420 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Slc44a1Q6X893 653 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Pms1Q8K119 917 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 BrapQ99MP8 591 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 NrapQ80XB4 1728 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Cacnb3P54285 484 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Ctdnep1Q3TP92 244 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Cnnm2Q3TWN3 875 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Prpf38aQ4FK66 312 aaKnown RBP28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Cep55Q8BT07 462 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Sil1Q9EPK6 465 aa28.46■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Col24a1Q30D77 1733 aa28.45■■■□□ 2.15
Pcf11-205ENSMUST00000208255 Prss51A0A286YDY8 319 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Eef2kO08796 724 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 DaglaQ6WQJ1 1044 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Htatsf1Q8BGC0 757 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Lman1lQ8VCD3 505 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Borcs6Q9D6W8 360 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 RabggtaQ9JHK4 567 aa28.45■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Stat1P42225 749 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 LeprP48356 1162 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Oog3Q3UWY1 500 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Adgre1Q61549 931 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Fsd2Q8BZ52 692 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Gpr108Q91WD0 569 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Tmem79Q9D709 391 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Sept14Q9DA97 430 aa28.44■■■□□ 2.14
Pcf11-205ENSMUST00000208255 St18Q80TY4 1045 aa28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Rnf41Q8BH75 317 aa28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Trmt2aQ8BNV1 574 aaKnown RBP28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Slc27a3O88561 667 aa28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Pramel6Q810Y9 485 aa28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Yipf1Q91VU1 306 aa28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Efcc1Q9JJF6 558 aa28.43■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Tnni2P13412 182 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Pde6aP27664 859 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 FanccP50652 591 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Eef2P58252 858 aaKnown RBP28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Zdhhc9P59268 364 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Prdm1Q60636 856 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Tmem59lQ7TNI2 337 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Ttll4Q80UG8 1193 aa28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 HibadhQ99L13 335 aaKnown RBP28.42■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Ppef1O35655 650 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Fam178bQ24JP3 464 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Fam170aQ66LM6 333 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Sez6lQ6P1D5 963 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Otop3Q80UF9 577 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Shtn1Q8K2Q9 631 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Gripap1Q8VD04 806 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Gbp7Q91Z40 638 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Pes1Q9EQ61 584 aaKnown RBP28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Zfp804bA0A0G2JGH6 1343 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Ltbp2O08999 1813 aa28.41■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Flvcr1B2RXV4 560 aa28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Fam186bD3Z420 943 aa28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 PcQ05920 1178 aa28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Klhdc9Q3USL1 350 aa28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Scaf8Q6DID3 1268 aa28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Ubxn2aQ99KJ0 258 aa28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Fxr1Q61584 677 aaKnown RBP28.4■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Vmn2r23E9PXI5 849 aa28.39■■■□□ 2.14
Pcf11-205ENSMUST00000208255 Irf6P97431 467 aa28.39■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms