RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Micall1Q8BGT6 870 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Astn2Q80Z10 1352 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ccdc157Q5SPX1 718 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Map3k12Q60700 888 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ift20Q61025 132 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Arhgap24Q8C4V1 747 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Pcdhb22Q91XZ8 794 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Esyt2Q3TZZ7 845 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Large2Q5XPT3 690 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Arhgef2Q60875 985 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Nucks1Q80XU3 234 aaKnown RBP13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Taf7lQ9D3R9 471 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Lonp2Q9DBN5 852 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Cetn3O35648 167 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Pde1bQ01065 535 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Kif1bpQ6ZPU9 617 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 BlvraQ9CY64 295 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Homer2Q9QWW1 354 aa13.13□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Slx4Q6P1D7 1565 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ppp2r5cQ60996 524 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Liat1Q810M6 228 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Klhl7Q8BUL5 586 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Arpp21Q9DCB4 807 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Oas2E9Q9A9 742 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Atp6v1aP50516 617 aaKnown RBP13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Gzf1Q4VBD9 706 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Krit1Q6S5J6 736 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Pym1Q8CHP5 203 aaKnown RBP13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Acsl3Q9CZW4 720 aaKnown RBP13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Prl3d2F6R3P9 224 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Slc39a6Q8C145 765 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Znf830Q8R1N0 363 aaKnown RBP13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Gys2Q8VCB3 704 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Eya1P97767 591 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Trak2Q6P9N8 913 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Nedd9O35177 833 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Senp1P59110 640 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Kif11Q6P9P6 1052 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Calcoco1Q8CGU1 691 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Dbndd1Q9CZ00 160 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Drc3Q9D5E4 523 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 RpgrQ9R0X5 1001 aa13.12□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tmtc2Q56A06 836 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Cplx3Q8R1B5 158 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Grpel1Q99LP6 217 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ndufab1Q9CR21 156 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Fancd2Q80V62 1450 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Lrrc74aA0A1Y7VMD6 494 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Eya2O08575 532 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Utp18Q5SSI6 552 aaKnown RBP13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tpcn2Q8BWC0 731 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Cd2bp2Q9CWK3 342 aaKnown RBP13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Elf2Q9JHC9 593 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ap1b1O35643 943 aaKnown RBP13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Cacna2d2Q6PHS9 1154 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 SnrkQ8VDU5 748 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Scyl1Q9EQC5 806 aaKnown RBP13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Myl7Q9QVP4 175 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Sorbs3Q9R1Z8 733 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Zscan25B2RX31 543 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Mmp8O70138 465 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Parp2O88554 559 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Hoxc9P09633 260 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ptgs1P22437 602 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Traf1P39428 409 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tbc1d9bQ5SVR0 1263 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Slc7a6osQ7TPE5 306 aa13.11□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Gm45140A0A0N4SUM8 220 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tubb2aQ7TMM9 445 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Rassf4Q8CB96 322 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 PpanQ91YU8 470 aaKnown RBP13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Nxf1Q99JX7 618 aaKnown RBP13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 CactinQ9CS00 772 aaKnown RBP13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tubb2bQ9CWF2 445 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 CacybpQ9CXW3 229 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Prl3d3A0A0M6L0J6 224 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ccdc13D3YV10 709 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 VrtnQ3SYK4 740 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Taok1Q5F2E8 1001 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Atp2b4Q6Q477 1205 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Nop2Q922K7 793 aaKnown RBP13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Foxo3Q9WVH4 672 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Gm10110D3Z5M2 615 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Nlrx1Q3TL44 975 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Dnajc21E9Q8D0 531 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Clec11aO88200 328 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 NelfbQ8C4Y3 580 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Gipc1Q9Z0G0 333 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 TsksO54887 585 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ginm1Q91WR6 327 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Cep83Q9D5R3 692 aa13.1□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Bfsp1A2AMT1 669 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Prl7a2O54831 253 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Mcm5P49718 733 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Zbtb16Q3UQ17 673 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Oxr1Q4KMM3 866 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Fam228aQ8CDW1 299 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tmco4Q91WU4 631 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Bag2Q91YN9 210 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Sos2Q02384 1333 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms