RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Mroh9G5E8L9 891 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ift20Q61025 132 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Asxl1P59598 1514 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Kank1E9Q238 1360 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 G3bp2P97379 482 aaKnown RBP16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Tmx3Q8BXZ1 456 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Znf830Q8R1N0 363 aaKnown RBP16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Bst2Q8R2Q8 172 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ercc5P35689 1170 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Zrsr1Q64707 428 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Krt18P05784 423 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Fam228aQ8CDW1 299 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Thap12Q9CUX1 758 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Trim80Q3V061 624 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Serpinb1cQ5SV42 375 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Zbtb41Q811F1 908 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gtf3c5Q8R2T8 520 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rnf14Q9JI90 485 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ccdc152E9PX14 254 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Kcnh3Q9WVJ0 1095 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Il16O54824 1322 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Fam213aQ9CYH2 218 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Efhd1Q9D4J1 240 aa16.81■□□□□ 0.28
Chd3-201ENSMUST00000092971 Cracr2aQ3UP38 310 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ttc1Q91Z38 292 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 SarnpQ9D1J3 210 aaKnown RBP16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gbp6A0A0G2JDV3 611 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gm43302L7N1X8 611 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Tdo2P48776 406 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Timm10P62073 90 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rab11fip4Q8BQP8 635 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Atp2a1Q8R429 994 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Apol10bG3X9K7 334 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Sox13Q04891 613 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ankfy1Q810B6 1169 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Frmpd2A0A140LI67 1392 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Mcmdc2E9Q956 681 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Traf1P39428 409 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Stim2P83093 746 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rimbp2Q80U40 1072 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Nek11Q8C0Q4 628 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Cst12Q9DAN8 128 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Cog7Q3UM29 770 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Pabpn1lQ5XFR0 273 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ppp2r5aQ6PD03 486 aa16.8■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rbbp5Q8BX09 538 aaKnown RBP16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Bicc1Q99MQ1 977 aaKnown RBP16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 MesdQ9ERE7 224 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Taf7Q9R1C0 341 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ccdc121E9Q6D3 323 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gja8P28236 440 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 EhhadhQ9DBM2 718 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gm10093D3YYI8 482 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Hdac1O09106 482 aaKnown RBP16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gna15P30678 374 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Tmtc4Q8BG19 741 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Stoml1Q8CI66 399 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Pcdhb5Q91XZ5 792 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Islr2Q5RKR3 745 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Trim21Q62191 470 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Nlrp14Q6B966 993 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Clec16aQ80U30 1036 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Nucks1Q80XU3 234 aaKnown RBP16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Klhl20Q8VCK5 604 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gtpbp4Q99ME9 634 aaKnown RBP16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 NrkQ9R0G8 1455 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 DohhA0A1Y7VJ29 135 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Taok1Q5F2E8 1001 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Mybpc2Q5XKE0 1136 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 MmeQ61391 750 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ppp4r3aQ6P2K6 820 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rdm1Q9CQK3 281 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Dnaaf1Q9D2H9 634 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Tubb4aQ9D6F9 444 aa16.79■□□□□ 0.28
Chd3-201ENSMUST00000092971 Cct6aP80317 531 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ptpn14Q62130 1189 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ap1b1O35643 943 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Lrriq3Q14DL3 633 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Herc4Q6PAV2 1057 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Plcd1Q8R3B1 756 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Psip1Q99JF8 528 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 BrapQ99MP8 591 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Fyb2A2A995 729 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Pak1O88643 545 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Sem1P60897 70 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Satb1Q60611 764 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Arhgef1Q61210 920 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gpbp1Q6NXH3 473 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gbp5Q8CFB4 590 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ddx41Q91VN6 622 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rabep2Q91WG2 554 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Golga5Q9QYE6 729 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Cyp2j7A0A140T8U1 504 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Xrcc6P23475 608 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Evi5P97366 809 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Map3k12Q60700 888 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Tbx22Q8K402 517 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Hexim1Q8R409 356 aaKnown RBP16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gm4981Q3ULJ8 291 aa16.78■□□□□ 0.28
Chd3-201ENSMUST00000092971 Haus6Q6NV99 933 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 70.3 ms