RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Tmed8Q3UHI4 326 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 SfswapQ3USH5 945 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Ehmt1Q5DW34 1296 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Rnf214Q8BFU3 668 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Ttc12Q8BW49 704 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Nup88Q8CEC0 753 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Bola3Q8CEI1 110 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Plcd1Q8R3B1 756 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 NsmfQ99NF2 532 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Sytl4Q9R0Q1 673 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Metap2O08663 478 aaKnown RBP8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Dynll1P63168 89 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Bach2P97303 839 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Esyt2Q3TZZ7 845 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Cdkl5Q3UTQ8 938 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 PsdQ5DTT2 1024 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Fchsd1Q6PFY1 688 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 U2af1l4Q8BGJ9 220 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Hps6Q8BLY7 805 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Inpp5bQ8K337 993 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Rbm33Q9CXK9 1231 aaKnown RBP8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Col20a1Q923P0 1320 aa8.79□□□□□ -1
Trim40-201ENSMUST00000087158 Cfap99A0A140LIX9 648 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Tnni2P13412 182 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 CgnP59242 1191 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Ppfia3P60469 1194 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Cplx2P84086 134 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Ckap2Q3V1H1 664 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Ubash3aQ3V3E1 624 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Best3Q6H1V1 669 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Ccdc82Q6PG04 518 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Tmem179Q8BHH9 233 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 DymQ8CHY3 669 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Terf2ipQ91VL8 393 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Adgra3Q7TT36 1310 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Rgs12Q8CGE9 1381 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Pet2A2AHY8 747 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Bnip3O55003 187 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Mtx1P47802 317 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Csrnp1P59054 583 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Casc1Q6TDU8 730 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Zscan22Q8BGS5 496 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Naa30Q8CES0 364 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Wdr24Q8CFJ9 790 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 MlphQ91V27 590 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 SrrtQ99MR6 875 aaKnown RBP8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Trmt44Q9D2Q2 713 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 1700018B08RikQ9DA83 213 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Znf704Q9ERQ3 566 aa8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Rbm6S4R1W5 1118 aaKnown RBP8.78□□□□□ -1
Trim40-201ENSMUST00000087158 Chd5A2A8L1 1946 aa8.77□□□□□ -1
Trim40-201ENSMUST00000087158 CpdO89001 1377 aa8.77□□□□□ -1
Trim40-201ENSMUST00000087158 AfdnQ9QZQ1 1820 aaKnown RBP8.77□□□□□ -1
Trim40-201ENSMUST00000087158 Naaladl2A0A0N4SUJ3 795 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gm45140A0A0N4SUM8 220 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Klhl34A2AI76 644 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Foxp1P58462 705 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Pdap1Q3UHX2 181 aaKnown RBP8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Spata5Q3UMC0 893 aaKnown RBP8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cdcp1Q5U462 833 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ctr9Q62018 1173 aaKnown RBP8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ifit1Q64282 463 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 HelbQ6NVF4 1074 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 9230110C19RikQ8CC70 267 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Mtmr3Q8K296 1196 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Sirt2Q8VDQ8 389 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cdc45Q9Z1X9 566 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Nup188Q6ZQH8 1759 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 NesQ6P5H2 1864 aaKnown RBP8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Togaram1Q6A070 1776 aaKnown RBP8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gm3893E9Q1I1 302 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Kif3aP28741 701 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gas1Q01721 343 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ncbp1Q3UYV9 790 aaKnown RBP8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Pcsk7Q61139 770 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Myl10Q62082 202 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Fam170aQ66LM6 333 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Msl1Q6PDM1 616 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Adck5Q80V03 582 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Samm50Q8BGH2 469 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Olfml1Q8BSH2 233 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Terb1Q8C0V1 768 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Uba5Q8VE47 403 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Bap1Q99PU7 728 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ndufa8Q9DCJ5 172 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 WtapQ9ER69 396 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 PdcQ9QW08 244 aa8.77□□□□□ -1.01
Trim40-201ENSMUST00000087158 Dock5B2RY04 1868 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Znf638Q61464 1960 aaKnown RBP8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 FosbP13346 338 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Hvcn1Q3U2S8 269 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Zfp51Q3U4L8 781 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Glg1Q61543 1175 aaKnown RBP8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Srek1Q8BZX4 494 aaKnown RBP8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 SdsQ8VBT2 327 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Grpel1Q99LP6 217 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cnpy3Q9DAU1 276 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Epb41l3Q9WV92 929 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Suclg2Q9Z2I8 433 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Myh6Q02566 1938 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms