RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Krt84Q99M73 603 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Fam184aE9PW83 1143 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Metap2O08663 478 aaKnown RBP13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Mapkapk5O54992 473 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Usp25P57080 1055 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Siah1aP61092 282 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Mtmr3Q8K296 1196 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ccer1Q9CQL2 403 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Efcc1Q9JJF6 558 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Plch1Q4KWH5 1682 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Atp2b1G5E829 1220 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Slurp2P0DP59 97 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 CalrP14211 416 aaKnown RBP13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Llgl2Q3TJ91 1027 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Nyap1Q6PFX7 833 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Rbm15bQ6PHZ5 887 aaKnown RBP13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Olfm5Q8BU90 496 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 9230110C19RikQ8CC70 267 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Q8VDP2 222 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Add3Q9QYB5 706 aaKnown RBP13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Med23Q80YQ2 1367 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Becn1O88597 448 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Abl1P00520 1123 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Nap1l1P28656 391 aaKnown RBP13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tlr8P58682 1032 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Lrriq3Q14DL3 633 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Fam163bQ8BUM6 167 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Taok3Q8BYC6 898 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tbx22Q8K402 517 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Sf3b3Q921M3 1217 aaKnown RBP13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Sh3bp5lQ99LH9 392 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Dpf1Q9QX66 387 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Scn11aQ9R053 1765 aa13.06□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Frmd7A2AD83 703 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Wdr78E9PYY5 807 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Gm20425E9Q035 978 aaKnown RBP13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 SrprbP47758 269 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Adcy5P84309 1262 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ccdc174Q3U155 467 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 RtcbQ99LF4 505 aaKnown RBP13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Nfe2l3Q9WTM4 660 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 EvplQ9D952 2035 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ccdc112A0AUP1 442 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Izumo3A6PWV3 263 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Cfap58B2RW38 873 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Casp12O08736 419 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Stat5bP42232 786 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 CebpaP53566 359 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Nub1P54729 614 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tyro3P55144 880 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ppp1r21Q3TDD9 780 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Zrsr2Q62377 462 aaKnown RBP13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Bola3Q8CEI1 110 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Fez1Q8K0X8 392 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 McamQ8R2Y2 648 aaKnown RBP13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Naa16Q9DBB4 864 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tulp1Q9Z273 543 aa13.05□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Pet2A2AHY8 747 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ankrd63A2ARS0 390 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Gm7347D3YYI9 267 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Speer4aF8VPX6 267 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Prl7d1P04769 244 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tpm3P21107 285 aaKnown RBP13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Acnat2Q8BGG9 420 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Suclg2Q9Z2I8 433 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Sall1Q9ER74 1322 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Dynll1P63168 89 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Fam83bQ0VBM2 1012 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 SfswapQ3USH5 945 aaKnown RBP13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 HlfQ8BW74 295 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Sde2Q8K1J5 448 aaKnown RBP13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Hnrnpul1Q8VDM6 859 aaKnown RBP13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Clic4Q9QYB1 253 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Nup98Q6PFD9 1816 aaKnown RBP13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Myh15E9Q264 1925 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Myh4Q5SX39 1939 aa13.04□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Dnai2A2AC93 623 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Dennd3A2RT67 1274 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Impdh2P24547 514 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Pax3P24610 479 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Rps8P62242 208 aaKnown RBP13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Otop3Q80UF9 577 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ttc12Q8BW49 704 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 HdlbpQ8VDJ3 1268 aaKnown RBP13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Cdc45Q9Z1X9 566 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 C4bP01029 1738 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Sec62Q8BU14 398 aaKnown RBP13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Afg3l2Q8JZQ2 802 aaKnown RBP13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Col4a3bpQ9EQG9 624 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Arhgap33Q80YF9 1305 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Smc2Q8CG48 1191 aaKnown RBP13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Pcdhb15Q91Y04 786 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Zcrb1Q9CZ96 217 aaKnown RBP13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Clstn1Q9EPL2 979 aa13.03□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Bnip3O55003 187 aa13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Fbln2P37889 1221 aa13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 HelbQ6NVF4 1074 aa13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Cfap69Q8BH53 942 aa13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Hook1Q8BIL5 728 aa13.02□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ranbp6Q8BIV3 1105 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms