RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Ell2Q3UKU1 639 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Nlrp9aQ66X03 949 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Zfyve9A2A8R0 1397 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Rsrc2A2RTL5 376 aaKnown RBP13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Casp1P29452 402 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ncoa7Q6DFV7 943 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Brms1Q99N20 246 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Dydc2Q9D3X8 139 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Popdc2Q9ES82 367 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Chaf1aQ9QWF0 911 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 Nek3Q9R0A5 511 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 4931408C20RikE9PWP9 1381 aa13.07□□□□□ -0.32
Trim23-203ENSMUST00000069187 1700017N19RikA0A087WPJ1 469 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Znf326O88291 580 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Rps8P62242 208 aaKnown RBP13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Cct8l1Q80YT3 562 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Kri1Q8VDQ9 704 aaKnown RBP13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Fam84aQ9D650 292 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Stxbp4Q9WV89 557 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Fam198bQ3UPI1 517 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ctnna3Q65CL1 895 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Abcb6Q9DC29 842 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Prl7d1P04769 244 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Specc1lQ2KN98 1118 aaKnown RBP13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Iqcb1Q8BP00 598 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Bicdl2Q8CHW5 507 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Yeats4Q9CR11 227 aaKnown RBP13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Filip1Q9CS72 1211 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Fbxo3Q9DC63 480 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ccne2Q9Z238 404 aa13.06□□□□□ -0.32
Trim23-203ENSMUST00000069187 Slc4a1P04919 929 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Bag1Q60739 355 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ifit1Q64282 463 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Slc14a2Q8R4T9 930 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ppp4r3bQ922R5 820 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Prdm11A2AGX3 565 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ccdc191J3QQ27 883 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Nat10Q8K224 1024 aaKnown RBP13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Sf3b3Q921M3 1217 aaKnown RBP13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ccdc83Q9D4V3 305 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Adarb2Q9JI20 745 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Myh1Q5SX40 1942 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Cfap99A0A140LIX9 648 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Rufy2Q8R4C2 606 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Mtmr6Q8VE11 617 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Dctpp1Q9QY93 170 aa13.05□□□□□ -0.32
Trim23-203ENSMUST00000069187 Gm43638A0A0J9YU36 694 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Gm4340L7N2C4 268 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 GabrdP22933 449 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Sept1P42209 366 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 LyarQ08288 388 aaKnown RBP13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Atp8b1Q148W0 1251 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Washc4Q3UMB9 1173 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Tmco3Q8BH01 678 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Usp44Q8C2S0 711 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Tubb4bP68372 445 aaKnown RBP13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Pram1Q6BCL1 675 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Fhod1Q6P9Q4 1197 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ppp2r2cQ8BG02 447 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Fsd2Q8BZ52 692 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Rbm17Q8JZX4 405 aaKnown RBP13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Rgs9O54828 675 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Sptlc3Q8BG54 563 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Abca3Q8R420 1704 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Stk38Q91VJ4 465 aa13.04□□□□□ -0.32
Trim23-203ENSMUST00000069187 Grin2dQ03391 1323 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Prl3d1P18121 224 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 TxlnaQ6PAM1 554 aaKnown RBP13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 AidaQ8C4Q6 305 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Cd209bQ8CJ91 325 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Tmx1Q8VBT0 278 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Lonp2Q9DBN5 852 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Pes1Q9EQ61 584 aaKnown RBP13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Kcnq5Q9JK45 933 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Setdb1O88974 1307 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Izumo3A6PWV3 263 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Mdh1P14152 334 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Slc7a3P70423 618 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 NpeppsQ11011 920 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Slc39a11Q8BWY7 342 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ccdc158Q8CDI6 1109 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Wdr19Q3UGF1 1341 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Npc1l1Q6T3U4 1333 aa13.03□□□□□ -0.32
Trim23-203ENSMUST00000069187 Cyp3a57D3YYZ0 503 aa13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 Znf496Q5SXI5 585 aa13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 McamQ8R2Y2 648 aaKnown RBP13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 Sipa1l3G3X9J0 1776 aa13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 Slc1a4O35874 532 aa13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 Lmbrd2Q8C561 694 aa13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 Irs4Q9Z0Y7 1216 aa13.02□□□□□ -0.32
Trim23-203ENSMUST00000069187 Arap2Q8BZ05 1703 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 CrcpO35427 148 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Hap1O35668 628 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gng11P61953 73 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Emc10Q3TAS6 258 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Trim25Q61510 634 aaKnown RBP13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 TrhQ62361 256 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gm21985Q6P6P5 1106 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ccdc82Q6PG04 518 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Zfp202Q8C879 641 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms