RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Pcdhgc5Q91XW9 944 aa10.32□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Lancl2Q9JJK2 450 aa10.32□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Shroom4Q1W617 1475 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Pramel3A2AHA7 463 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 GabreA2AMW3 916 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Gm7903A2AWL1 463 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Gm4787B2RUD9 748 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Doc2bP70169 412 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 HrQ61645 1182 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Pif1Q80SX8 650 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Etf1Q8BWY3 437 aaKnown RBP10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Coq6Q8R1S0 476 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Ndufb9Q9CQJ8 179 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Raver1Q9CW46 748 aaKnown RBP10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Q9D5Y0 588 aa10.31□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Grin2aP35436 1464 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Col17a1Q07563 1470 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Magi3Q9EQJ9 1476 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 KprpB2RUR4 657 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Hoxd3P09027 433 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Man2a1P27046 1150 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Sstr4P49660 385 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Lrig2Q52KR2 1054 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Znf592Q8BHZ4 1262 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 NeproQ8R2U2 564 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Kif18aQ91WD7 886 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 TirapQ99JY1 241 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Ampd2Q9DBT5 798 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Usp21Q9QZL6 566 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Bnip3lQ9Z2F7 218 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Rad54l2Q99NG0 1466 aa10.3□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Gm2956E9PVJ0 216 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Gm8108K7N734 216 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Gm3488M0QW81 238 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Timm13P62075 95 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Ggnbp2Q5SV77 696 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Dennd5aQ6PAL8 1287 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Nrde2Q80XC6 1172 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Gtpbp10Q8K013 366 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Pcolce2Q8R4W6 414 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Jam2Q9JI59 298 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Dnaja2Q9QYJ0 412 aa10.29□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 SynmQ70IV5 1561 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Hoxb2P0C1T1 354 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Jmjd7P0C872 316 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Mesp1P97309 243 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Prdm1Q60636 856 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Hapln4Q80WM4 400 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Krt25Q8VCW2 446 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Polr3kQ9CQZ7 108 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Epm2aQ9WUA5 330 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Zcchc11B2RX14 1644 aaKnown RBP10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 AqrQ8CFQ3 1481 aaKnown RBP10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Syde2E9PUP1 1314 aa10.28□□□□□ -0.76
Ccdc54-201ENSMUST00000062439 Diaph1O08808 1255 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Asap3Q5U464 904 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 DrgxQ8BYH0 263 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 CrbnQ8C7D2 445 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 FbrsQ8R089 466 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Vmn1r42Q8VBS7 329 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Vmn1r43Q8VIC9 329 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Prpf4Q9DAW6 521 aaKnown RBP10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 PtprkP35822 1457 aa10.27□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Gm18336A0A140LIU8 765 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Gm10471E9Q1C7 252 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Hrh1P70174 488 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Trpc6Q61143 930 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 CrkQ64010 304 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Usp1Q8BJQ2 784 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Fsd2Q8BZ52 692 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Ttc23Q8CHY7 488 aa10.26□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Fam181aJ3QNB7 292 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Nectin2P32507 530 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Rab33aP97950 237 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Phactr4Q501J7 694 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 P3h4Q8K2B0 443 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Zdhhc1Q8R0N9 484 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Isl2Q9CXV0 359 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Moap1Q9ERH6 352 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Pgpep1Q9ESW8 209 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Tle2Q9WVB2 767 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Pla2g1bQ9Z0Y2 146 aa10.25□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Pla2r1Q62028 1487 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Stk10O55098 966 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Tnni2P13412 182 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 ArntP53762 791 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 StimateQ3UF25 288 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Ppp2r5eQ61151 467 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Ift57Q8BXG3 429 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Mrpl58Q8R035 206 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Hps3Q91VB4 1002 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Gdpd3Q99LY2 330 aa10.24□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Vsig10lD3YZF7 868 aa10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Zfp358E9Q8M1 571 aa10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Bcl7cO08664 217 aa10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Lmntd2Q0VET5 664 aa10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Aebp1Q640N1 1128 aa10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 PoliQ6R3M4 717 aa10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Gnl3Q8CI11 538 aaKnown RBP10.23□□□□□ -0.77
Ccdc54-201ENSMUST00000062439 Zcchc18Q8VD24 393 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms