RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Usp13Q5BKP2 858 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Tbc1d5Q80XQ2 815 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Terb1Q8C0V1 768 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Vps33aQ9D2N9 598 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Cxcl11Q9JHH5 100 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Atp8b5A3FIN4 1183 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Pde11aP0C1Q2 933 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 SsbP32067 415 aaKnown RBP16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Tpm1P58771 284 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Frat1P70339 274 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Zfp397Q7TNK4 527 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Clec16aQ80U30 1036 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 MbipQ99LQ1 341 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Krt23Q99PS0 422 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Pold4Q9CWP8 107 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Stk39Q9Z1W9 556 aa16■□□□□ 0.15
Lime1-201ENSMUST00000048077 Ap5z1Q3U829 807 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Taf3Q5HZG4 932 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Cyp7b1Q60991 507 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Krt40Q6IFX3 439 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Luc7l2Q7TNC4 392 aaKnown RBP15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Olfr119Q7TRJ5 321 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Cep120Q7TSG1 988 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Gimap5Q8BWF2 308 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 NgdnQ9DB96 315 aaKnown RBP15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Eif4enif1Q9EST3 983 aaKnown RBP15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 Nhsl1Q8CAF4 1587 aa15.99■□□□□ 0.15
Lime1-201ENSMUST00000048077 A0A1L1SQF0 893 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Npy5rO70342 466 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Myo1aO88329 1043 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 GmnnO88513 206 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Sec23aQ01405 765 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Snai1Q02085 264 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Ddb1Q3U1J4 1140 aaKnown RBP15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Zc3h12cQ5DTV4 884 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Znf496Q5SXI5 585 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Cyp24a1Q64441 514 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Olfr118Q7TRJ6 321 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Mapk8ip1Q9WVI9 707 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Vnn1Q9Z0K8 512 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Ktn1Q61595 1327 aaKnown RBP15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Acad12D3Z7X0 555 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Card6E9PWH2 1175 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Stat5bP42232 786 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Prl2c1Q5SVL9 228 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Kif1bpQ6ZPU9 617 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Ehd2Q8BH64 543 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Miga2Q8BK03 593 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Gys2Q8VCB3 704 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Atp12aQ9Z1W8 1035 aa15.98■□□□□ 0.15
Lime1-201ENSMUST00000048077 Myh15E9Q264 1925 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Zscan20B2KFW1 1030 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Slc1a4O35874 532 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Slc27a1Q60714 646 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Ttc12Q8BW49 704 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Slc39a11Q8BWY7 342 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Vps53Q8CCB4 832 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Sf3b3Q921M3 1217 aaKnown RBP15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Dpf1Q9QX66 387 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Znf609Q8BZ47 1413 aa15.97■□□□□ 0.15
Lime1-201ENSMUST00000048077 Zbtb7aO88939 569 aaKnown RBP15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Nbr1P97432 988 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Dnm3Q8BZ98 863 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Klc3Q91W40 508 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Phrf1A6H619 1682 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Aox3G3X982 1335 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Cyp3a25O09158 503 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 LtkP08923 888 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Siah1aP61092 282 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 VeztQ3ZK22 780 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Slfnl1Q8BHW9 410 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Kcnj14Q8JZN3 434 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Bap1Q99PU7 728 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Cep89Q9CZX2 791 aa15.96■□□□□ 0.15
Lime1-201ENSMUST00000048077 Dock5B2RY04 1868 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Ces1hD3Z298 562 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Tpm3-rs7D3Z2H9 248 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Cyp2c23E9Q5K4 494 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Tuft1O08970 390 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Calm1P0DP26 149 aaKnown RBP15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Calm2P0DP27 149 aaKnown RBP15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Calm3P0DP28 149 aaKnown RBP15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Tdo2P48776 406 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Dnajc2P54103 621 aaKnown RBP15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Gimap8Q75N62 688 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 ParvgQ9ERD8 331 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Gm5624F6ZZG8 207 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Kiaa1468Q148V7 1216 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Znf653Q6YND2 615 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Asnsd1Q8BFS9 627 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Enox1Q8BHR2 643 aaKnown RBP15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Znf526Q8BI66 675 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Prpf3Q922U1 683 aaKnown RBP15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Tgs1Q923W1 853 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Lmbr1Q9JIT0 490 aa15.95■□□□□ 0.14
Lime1-201ENSMUST00000048077 Myh4Q5SX39 1939 aa15.94■□□□□ 0.14
Lime1-201ENSMUST00000048077 Arfgef1G3X9K3 1846 aaKnown RBP15.94■□□□□ 0.14
Lime1-201ENSMUST00000048077 Glis3Q6XP49 780 aa15.94■□□□□ 0.14
Lime1-201ENSMUST00000048077 Taok2Q6ZQ29 1240 aa15.94■□□□□ 0.14
Lime1-201ENSMUST00000048077 Brd3Q8K2F0 726 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms