RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Tbc1d2bQ3U0J8 965 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Rnf41Q8BH75 317 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Ly6iQ9WU67 134 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 En2P09066 324 aa26.79■■□□□ 1.88
Upf3a-201ENSMUST00000043767 CrkQ64010 304 aa26.79■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Tubb6Q922F4 447 aa26.79■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Dynll2Q9D0M5 89 aa26.79■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Pde3aQ9Z0X4 1141 aa26.79■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Gm36210A0A1B0GS00 229 aa26.78■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Aak1Q3UHJ0 959 aa26.78■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Cpa2Q504N0 417 aa26.78■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Psme4Q5SSW2 1843 aa26.78■■□□□ 1.88
Upf3a-201ENSMUST00000043767 DnttP09838 530 aa26.78■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Fsd1Q7TPM6 496 aa26.78■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Tcof1O08784 1320 aaKnown RBP26.77■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Nxf7Q80SZ6 620 aaKnown RBP26.77■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Myh6Q02566 1938 aaKnown RBP26.77■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Psmd14O35593 310 aa26.77■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Iffo2Q8R2V2 512 aa26.77■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Col5a2Q3U962 1497 aa26.76■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Spata18Q0P557 537 aa26.76■■□□□ 1.87
Upf3a-201ENSMUST00000043767 DaglaQ6WQJ1 1044 aa26.76■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Prpf38aQ4FK66 312 aaKnown RBP26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Mrps5Q99N87 432 aaKnown RBP26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Dnajc2P54103 621 aaKnown RBP26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Cacnb3P54285 484 aa26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 PogkQ80TC5 607 aa26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 9230110C19RikQ8CC70 267 aa26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 DymQ8CHY3 669 aa26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Alg3Q8K2A8 438 aa26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Zbed3Q9D0L1 228 aa26.75■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Gm45015A0A140LII9 184 aa26.74■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Gm18336A0A140LIU8 765 aa26.74■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Dpf2Q61103 391 aaKnown RBP26.74■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Pdcl2Q78Y63 240 aa26.74■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Ndufv1Q91YT0 464 aa26.74■■□□□ 1.87
Upf3a-201ENSMUST00000043767 HibadhQ99L13 335 aaKnown RBP26.74■■□□□ 1.87
Upf3a-201ENSMUST00000043767 AfdnQ9QZQ1 1820 aaKnown RBP26.73■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Slc10a5Q5PT54 434 aa26.73■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Fxr1Q61584 677 aaKnown RBP26.73■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Rufy2Q8R4C2 606 aa26.73■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Gpr108Q91WD0 569 aa26.73■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Suclg2Q9Z2I8 433 aa26.73■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Nmt2O70311 529 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Tmed8Q3UHI4 326 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Hps6Q8BLY7 805 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Terb1Q8C0V1 768 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Gripap1Q8VD04 806 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Znf638Q61464 1960 aaKnown RBP26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Ano3A2AHL1 981 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Cyp26a1O55127 497 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Tpm2P58774 284 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Usp48Q3V0C5 1052 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Glipr1l2Q9CQ35 332 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 4931400O07RikQ9D4M5 137 aa26.72■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Plekhg2Q6KAU7 1340 aa26.71■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Slc1a4O35874 532 aa26.71■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Klhdc9Q3USL1 350 aa26.71■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Me3Q8BMF3 604 aa26.71■■□□□ 1.87
Upf3a-201ENSMUST00000043767 QarsQ8BML9 775 aa26.71■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Ecm29Q6PDI5 1840 aa26.71■■□□□ 1.87
Upf3a-201ENSMUST00000043767 ArsiQ32KI9 573 aa26.7■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Gm2163Q6PCY5 473 aa26.7■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Nol12Q8BG17 217 aa26.7■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Fez1Q8K0X8 392 aa26.7■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Nup133Q8R0G9 1155 aa26.7■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Xrcc4Q924T3 326 aa26.7■■□□□ 1.87
Upf3a-201ENSMUST00000043767 Eef2P58252 858 aaKnown RBP26.7■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Znf667Q2TL60 609 aa26.7■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Vil1Q62468 827 aa26.7■■□□□ 1.86
Upf3a-201ENSMUST00000043767 1700003F12RikA2AKE5 210 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Il7P10168 154 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Psmd1Q3TXS7 953 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Trmt2aQ8BNV1 574 aaKnown RBP26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Ptrh1Q8BW00 204 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Tpcn2Q8BWC0 731 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Sirt2Q8VDQ8 389 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 D830030K20RikE9PYQ5 218 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Arid4aF8VPQ2 1261 aaKnown RBP26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gm3043K7N693 218 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gm16440K7N6G6 218 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gm2244L7N2A3 218 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gm3278L7N2D2 218 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gm8271L7N2E2 218 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Magea1O89006 320 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Magea5O89009 320 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Sec23aQ01405 765 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 PcQ05920 1178 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Fam178bQ24JP3 464 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 VrtnQ3SYK4 740 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Glrx3Q9CQM9 337 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 WtapQ9ER69 396 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Magea2Q9R2A2 320 aa26.69■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Lbhd1A0A087WPA0 259 aa26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Usp53P15975 1069 aa26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Bms1Q6PGF5 1284 aaKnown RBP26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Tor1aip2Q8BYU6 502 aa26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Paf1Q8K2T8 535 aa26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Bloc1s2Q9CWG9 143 aa26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Stx6Q9JKK1 255 aa26.68■■□□□ 1.86
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms