RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Prl3d1P18121 224 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Gm12185Q5NCB2 835 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Enox1Q8BHR2 643 aaKnown RBP21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Haus7Q8BKT8 364 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Magi2Q9WVQ1 1275 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Ccne2Q9Z238 404 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Zbtb38Q3LR78 1197 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Nlrp9aQ66X03 949 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Edrf1Q6GQV7 1239 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Ccdc39Q9D5Y1 937 aa21.81■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Crb1Q8VHS2 1405 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Snapc4Q8BP86 1333 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Naaladl2A0A0N4SUJ3 795 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Mcm6P97311 821 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Clec16aQ80U30 1036 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Rbm33Q9CXK9 1231 aaKnown RBP21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Atp8b5A3FIN4 1183 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Diaph1O08808 1255 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 PnnO35691 725 aaKnown RBP21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Slitrk3Q810B9 980 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Clca2Q8BG22 942 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Q8CEZ4 452 aa21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Smc2Q8CG48 1191 aaKnown RBP21.8■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Gng11P61953 73 aa21.79■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Prdm1Q60636 856 aa21.79■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Arl8aQ8VEH3 186 aa21.79■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 MicalclQ9D5U9 680 aa21.79■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Baiap2l1Q9DBJ3 514 aa21.79■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Actn3O88990 900 aaKnown RBP21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 NefhP19246 1090 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Gabpb2P81069 414 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Cnnm2Q3TWN3 875 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Ncoa7Q6DFV7 943 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Slc44a1Q6X893 653 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Iqcb1Q8BP00 598 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Nek9Q8K1R7 984 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Paf1Q8K2T8 535 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 PappaQ8R4K8 1624 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Samd1D3YXK1 519 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Tdo2P48776 406 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Ranbp6Q8BIV3 1105 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Tubgcp2Q921G8 905 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Klhl40Q9D783 621 aa21.78■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Pde4bB1AWC9 736 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Gpr182P43142 395 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Irx2P81066 474 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Krt39Q6IFX4 482 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Fchsd1Q6PFY1 688 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Taok3Q8BYC6 898 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Lrrc2Q8VDB8 371 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Krt23Q99PS0 422 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Fbxo3Q9DC63 480 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Sil1Q9EPK6 465 aa21.77■■□□□ 1.08
Ccdc50-201ENSMUST00000039443 Acad12D3Z7X0 555 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 4930523C07RikE9Q2T4 99 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Cyp2d9P11714 504 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tmco3Q8BH01 678 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Ankk1Q8BZ25 745 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Q8K2W9 541 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Cbx6Q9DBY5 414 aa21.77■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 AW822073A0A0N4SUK1 652 aa21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Dnajc25A2ALW5 357 aa21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Llgl2Q3TJ91 1027 aa21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Trim25Q61510 634 aaKnown RBP21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Znf653Q6YND2 615 aa21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tc2nQ91XT6 489 aa21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Emilin1Q99K41 1017 aa21.76■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Rsrc2A2RTL5 376 aaKnown RBP21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Prl2c1Q5SVL9 228 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Abtb2Q7TQI7 1024 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Olfr119Q7TRJ5 321 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Atp1a4Q9WV27 1032 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Setdb1O88974 1307 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Cdc27A2A6Q5 825 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Pla2g4bP0C871 782 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Ccdc174Q3U155 467 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Nme8Q715T0 586 aa21.75■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Dnajc2P54103 621 aaKnown RBP21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tubb4bP68372 445 aaKnown RBP21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Dpf2Q61103 391 aaKnown RBP21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Pde5aQ8CG03 865 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tspyl4Q8VD63 406 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Sept1P42209 366 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Acap3Q6NXL5 833 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tubb2aQ7TMM9 445 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Wdr3Q8BHB4 942 aaKnown RBP21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Anks1bQ8BIZ1 1259 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tubb2bQ9CWF2 445 aa21.74■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Cyp19a1P28649 503 aa21.73■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Adssl1P28650 457 aa21.73■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Kcnq3Q8K3F6 873 aa21.73■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Cep89Q9CZX2 791 aa21.73■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Tbc1d7Q9D0K0 293 aa21.73■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Polr2dQ9D7M8 142 aaKnown RBP21.73■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 NapbP28663 298 aa21.72■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Sdc2P43407 202 aa21.72■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Nek1P51954 1203 aa21.72■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Shank3Q4ACU6 1730 aa21.72■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 Cyp7b1Q60991 507 aa21.72■■□□□ 1.07
Ccdc50-201ENSMUST00000039443 BcanQ61361 883 aa21.72■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms