RNA–Protein interactions for RNA: ENSMUST00000037903.14

Pkp4-201, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,378 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-201ENSMUST00000037903 A0A1Y7VML8 143 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Igf2bp2Q5SF07 592 aaKnown RBP12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Vps37dQ810I0 261 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Usp53P15975 1069 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Frat1P70339 274 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Abcf1Q6P542 837 aaKnown RBP12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ctdspl2Q8BG15 465 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Sept12Q9D451 317 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Xpo4Q9ESJ0 1151 aa12.87□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Med1Q925J9 1575 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 PparaP23204 468 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Atp6v1aP50516 617 aaKnown RBP12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Tacc1Q6Y685 774 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Add3Q9QYB5 706 aaKnown RBP12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Med23Q80YQ2 1367 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cd3dP04235 173 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 VrtnQ3SYK4 740 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Znf496Q5SXI5 585 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Slc27a1Q60714 646 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Pknox2Q8BG99 474 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Fam102bQ8BQS4 339 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Vps18Q8R307 973 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Uba5Q8VE47 403 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Pcdhb5Q91XZ5 792 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Nup153E9Q3G8 1462 aaKnown RBP12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 GmnnO88513 206 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Foxp1P58462 705 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Olfr118Q7TRJ6 321 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Adck5Q80V03 582 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Slc4a8Q8JZR6 1089 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Chaf1aQ9QWF0 911 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ift172Q6VH22 1749 aa12.86□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Il15P48346 162 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 C87499Q3UX49 493 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Edrf1Q6GQV7 1239 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cyp4f39Q8BGU0 532 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cdan1Q8CC12 1239 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ppil4Q9CXG3 492 aaKnown RBP12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Zcrb1Q9CZ96 217 aaKnown RBP12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gm13023A2A8N2 498 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Oas2E9Q9A9 742 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Exosc10P56960 887 aaKnown RBP12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 ItpripQ3TNL8 555 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ttc27Q8CD92 847 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cyp2j7A0A140T8U1 504 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gng11P61953 73 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Uri1Q3TLD5 531 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Map3k12Q60700 888 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Secisbp2lQ6A098 1086 aaKnown RBP12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 HelbQ6NVF4 1074 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Slc13a4Q8BZ82 625 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gimap7Q8R379 293 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Kansl3A2RSY1 903 aaKnown RBP12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 MthfslL7N466 203 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 GnaqP21279 359 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 SsbP32067 415 aaKnown RBP12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Large2Q5XPT3 690 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ift88Q61371 824 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Tubgcp2Q921G8 905 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Arpp21Q9DCB4 807 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Kcnq5Q9JK45 933 aa12.85□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Sik3Q6P4S6 1311 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cxcl11Q9JHH5 100 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cep63Q3UPP8 700 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Madcam1Q61826 405 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Slc44a1Q6X893 653 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ccdc122Q8BVN0 290 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Kcnk13Q8R1P5 405 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gtf2iQ9ESZ8 998 aaKnown RBP12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gdf11Q9Z1W4 405 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Stk39Q9Z1W9 556 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Kiaa0232Q80U59 1396 aaKnown RBP12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Palm3A2TJV2 734 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gm5624F6ZZG8 207 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ptgs1P22437 602 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ces3aQ63880 571 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ehd2Q8BH64 543 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Ces3bQ8VCU1 571 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Dph6Q9CQ28 267 aa12.84□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cyp3a59D3Z2W7 503 aa12.83□□□□□ -0.35
Pkp4-201ENSMUST00000037903 CebpaP53566 359 aa12.83□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Necab1Q8BG18 352 aa12.83□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Cd274Q9EP73 290 aa12.83□□□□□ -0.35
Pkp4-201ENSMUST00000037903 Gm43638A0A0J9YU36 694 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Hdgfl1Q2VPR5 283 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Kif1bpQ6ZPU9 617 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Xrcc4Q924T3 326 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Ccdc96Q9CR92 584 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Cnpy3Q9DAU1 276 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 AmfrQ9R049 643 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Mx2Q9WVP9 655 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Znf568E9PYI1 671 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Fbln2P37889 1221 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Znf667Q2TL60 609 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Erich4Q3UNU4 136 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Prpf38aQ4FK66 312 aaKnown RBP12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Oxr1Q4KMM3 866 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 ErmnQ5EBJ4 281 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Smarcc2Q6PDG5 1213 aa12.83□□□□□ -0.36
Pkp4-201ENSMUST00000037903 Paf1Q8K2T8 535 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms