RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 CltaO08585 235 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Prl7d1P04769 244 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Kcnd1Q03719 651 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 PcQ05920 1178 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Olfr118Q7TRJ6 321 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Tcp11l1Q8BTG3 509 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Xpo4Q9ESJ0 1151 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Vnn1Q9Z0K8 512 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Epb41l2O70318 988 aaKnown RBP14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Anks1aP59672 1150 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 CtifQ6PEE2 600 aaKnown RBP14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Gimap8Q75N62 688 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Ttc12Q8BW49 704 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Gja10Q9WUS4 505 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Stk39Q9Z1W9 556 aa14.67□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Bicdl1A0JNT9 577 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Usp13Q5BKP2 858 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Rbm15bQ6PHZ5 887 aaKnown RBP14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Rec8Q8C5S7 591 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Evc2Q8K1G2 1220 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 MbipQ99LQ1 341 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 ParvgQ9ERD8 331 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Efcc1Q9JJF6 558 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Phrf1A6H619 1682 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Sycp2lA0A0M3U1B0 842 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Zbtb21E9Q444 1094 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Ampd3O08739 766 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Casp1P29452 402 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Spata5Q3UMC0 893 aaKnown RBP14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Otop3Q80UF9 577 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Kcnj14Q8JZN3 434 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Tspyl4Q8VD63 406 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Dctpp1Q9QY93 170 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Foxo3Q9WVH4 672 aa14.66□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Zscan29E9Q5B4 869 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Tuft1O08970 390 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Dnajc2P54103 621 aaKnown RBP14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Nxf2Q4ZGD8 691 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 MlphQ91V27 590 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Etnk1Q9D4V0 363 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Irs4Q9Z0Y7 1216 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Aox3G3X982 1335 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Dapk3O54784 448 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Smarcc1P97496 1104 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Cyp7b1Q60991 507 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 CpvlQ9D3S9 478 aa14.65□□□□□ -0.06
Rnf4-201ENSMUST00000030992 Tbc1d8bA3KGB4 1114 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Nbr1P97432 988 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 IntuQ059U7 942 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 HelbQ6NVF4 1074 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Kcnh3Q9WVJ0 1095 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Gm13023A2A8N2 498 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Atp1b3P97370 278 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 McamQ8R2Y2 648 aaKnown RBP14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Trim11Q99PQ2 467 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Nek3Q9R0A5 511 aa14.64□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Tnni2P13412 182 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Grin1P35438 938 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Gas2l3Q3UWW6 683 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Znf609Q8BZ47 1413 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ces1hD3Z298 562 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ms4a1P19437 291 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Dynll1P63168 89 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Prpf4bQ61136 1007 aaKnown RBP14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ppp2r5bQ6PD28 497 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Tbc1d5Q80XQ2 815 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ccdc150Q8CDI7 1110 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ccdc94Q9D6J3 314 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Pnpla6Q3TRM4 1355 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Slc7a1Q09143 622 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Fam89aQ14BJ1 175 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Lrrc43Q3V0L5 667 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Slc27a1Q60714 646 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Olfr119Q7TRJ5 321 aa14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Eif4enif1Q9EST3 983 aaKnown RBP14.63□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Trim30aP15533 496 aa14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 MsnP26041 577 aaKnown RBP14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Irf5P56477 497 aa14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Gpatch11Q3UFS4 262 aa14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 TfrcQ62351 763 aaKnown RBP14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Clec16aQ80U30 1036 aa14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Pla2g12bQ99P27 195 aa14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Heg1E9Q7X6 1337 aa14.62□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Pde4bB1AWC9 736 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cyp3a25O09158 503 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ctr9Q62018 1173 aaKnown RBP14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cep120Q7TSG1 988 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Pus7lQ8CE46 702 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Tob2Q9JM55 345 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 NesQ6P5H2 1864 aaKnown RBP14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ap5z1Q3U829 807 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Sass6Q80UK7 654 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cep89Q9CZX2 791 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ccdc39Q9D5Y1 937 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 1700018B08RikQ9DA83 213 aa14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Hic2Q9JLZ6 619 aaKnown RBP14.61□□□□□ -0.07
Rnf4-201ENSMUST00000030992 A0A1W2P7S8 802 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cdc27A2A6Q5 825 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Gm10134F6ZQC6 126 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 LtkP08923 888 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms