RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Calml3Q9D6P8 149 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Gkap1Q9JMB0 366 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Tspyl1O88852 379 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Znf830Q8R1N0 363 aaKnown RBP15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Sf3a3Q9D554 501 aaKnown RBP15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Wdr3Q8BHB4 942 aaKnown RBP15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ccdc40Q8BI79 1192 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Plekhg2Q6KAU7 1340 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Slc4a4O88343 1079 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ptgs1P22437 602 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Fam135bQ9DAI6 1403 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Xrcc4Q924T3 326 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Nlrp2Q4PLS0 1046 aaKnown RBP15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Klhl20Q8VCK5 604 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Slc12a5Q91V14 1138 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Asic2Q925H0 512 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Vat1lQ80TB8 417 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 BrapQ99MP8 591 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Znf568E9PYI1 671 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Art2aP17981 287 aa15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Pacsin2Q9WVE8 486 aaKnown RBP15.48■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Grm8P47743 908 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Birc2Q62210 612 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Lmod1Q8BVA4 595 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 MthfsQ9D110 203 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 4930548H24RikQ9D496 437 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Jade1Q6ZPI0 834 aaKnown RBP15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Fam228aQ8CDW1 299 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Retreg2Q6NS82 541 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Arhgef2Q60875 985 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Dbn1Q9QXS6 706 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Fen1P39749 378 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Znf697Q569E7 569 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 WizO88286 1684 aaKnown RBP15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Hoxb7P09024 217 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Tab2Q99K90 693 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 PalmdQ9JHU2 551 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ifit1bl2Q3U687 466 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Slc51bQ80WK2 128 aa15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Pdcd6ipQ9WU78 869 aaKnown RBP15.47■□□□□ 0.07
Col5a1-201ENSMUST00000028280 1700018F24RikB2RW27 314 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Slc12a2P55012 1205 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Trim27Q62158 513 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Lekr1B2RVN1 116 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Atp2b3Q0VF55 1220 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Krt222Q8CCX5 294 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Stoml1Q8CI66 399 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ddx41Q91VN6 622 aaKnown RBP15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Igf1rQ60751 1373 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Anks6Q6GQX6 883 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Rbm26Q6NZN0 1012 aaKnown RBP15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Trim16Q99PP9 556 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Flot1O08917 428 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Traf3ip3Q8C0G2 513 aa15.46■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ankrd6Q69ZU8 712 aa15.46■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Tmx3Q8BXZ1 456 aa15.46■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Stac3Q8BZ71 360 aa15.46■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Slc26a7Q8R2Z3 656 aa15.46■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Nlrp4cQ3TKR3 982 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Gm6588E9Q3K0 461 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Usp33Q8R5K2 909 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Pex1Q5BL07 1284 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Mlh3A0A1Y7VMP7 1443 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Zfp651E9PZ11 729 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 NxnP97346 435 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Spc25Q3UA16 226 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Ifih1Q8R5F7 1025 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Mcmdc2E9Q956 681 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Timm44O35857 452 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 PpardP35396 440 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Slx4ipQ9D7Y9 413 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Ctnna1P26231 906 aaKnown RBP15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Nucks1Q80XU3 234 aaKnown RBP15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Mrpl12Q9DB15 201 aaKnown RBP15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Tceanc2Q8R2M0 207 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 St13Q99L47 371 aaKnown RBP15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Thap12Q9CUX1 758 aa15.45■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Palm3A2TJV2 734 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Gm5624F6ZZG8 207 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Slc10a4Q3UEZ8 437 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Nkiras1Q8CEC5 192 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 PhbP67778 272 aaKnown RBP15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Gm10563F6WIE4 79 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Mpp4Q6P7F1 635 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Cacna2d2Q6PHS9 1154 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Tmtc4Q8BG19 741 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Klhl7Q8BUL5 586 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Frmd4bQ920B0 1035 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Ccdc70Q9D9B0 223 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Atp12aQ9Z1W8 1035 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Pdia3P27773 505 aaKnown RBP15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 EsrrgP62509 458 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Mindy4Q3UQI9 744 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Zc3h12cQ5DTV4 884 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Naip7Q9JIB3 1402 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Naip6Q9JIB6 1403 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Abcb4P21440 1276 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Pex19Q8VCI5 299 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Plcd1Q8R3B1 756 aa15.44■□□□□ 0.06
Col5a1-201ENSMUST00000028280 Pde3aQ9Z0X4 1141 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms