RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Znf653Q6YND2 615 aa14.03□□□□□ -0.16
Trim23-201ENSMUST00000022225 Flt4P35917 1363 aa14.03□□□□□ -0.16
Trim23-201ENSMUST00000022225 Vmn2r23E9PXI5 849 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Gm21671G3UY31 267 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Grm8P47743 908 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Krt86P97861 486 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Gngt1Q61012 74 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Ppm1eQ80TL0 749 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 IqcgQ80W32 419 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Pus3Q9JI38 481 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Znf335A2A5K6 1337 aa14.02□□□□□ -0.16
Trim23-201ENSMUST00000022225 Gm10471E9Q1C7 252 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Pbx1P41778 430 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Pla2g4aP47713 748 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Tax1bp1Q3UKC1 814 aaKnown RBP14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 HellsQ60848 821 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Phf8Q80TJ7 1023 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Xrcc4Q924T3 326 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Letm1Q9Z2I0 738 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Top1Q04750 767 aaKnown RBP14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Prl2c1Q5SVL9 228 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Prpf4bQ61136 1007 aaKnown RBP14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Mfap3lQ9D3X9 409 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Ccdc39Q9D5Y1 937 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Dydc1Q9D9T0 175 aa14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 Pdcd6ipQ9WU78 869 aaKnown RBP14.02□□□□□ -0.17
Trim23-201ENSMUST00000022225 PtprvP70289 1705 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Fkbp4P30416 458 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Flad1Q8R123 492 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Actn2Q9JI91 894 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Ric1Q69ZJ7 1422 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Arhgap6O54834 987 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 IkbkbO88351 757 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Cyp2d10P24456 504 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Surf6P70279 355 aaKnown RBP14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Tmem59lQ7TNI2 337 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Kcnh3Q9WVJ0 1095 aa14.01□□□□□ -0.17
Trim23-201ENSMUST00000022225 Nrg3O35181 713 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Sox5P35710 763 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Slc12a2P55012 1205 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Bbof1Q3V079 533 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Ddx46Q569Z5 1032 aaKnown RBP14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Haus7Q8BKT8 364 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Tldc1Q8K0P3 455 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Tcp11l2Q8K1H7 517 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 SarnpQ9D1J3 210 aaKnown RBP14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Pik3c2aQ61194 1686 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 NpeppsQ11011 920 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Sh3gl2Q62420 352 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Bpifb6Q8BU51 449 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Traf3ip3Q8C0G2 513 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Kif2bQ8C0N1 668 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Scn7aB1AYL1 1681 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Tlr9Q9EQU3 1032 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Setdb1O88974 1307 aa14□□□□□ -0.17
Trim23-201ENSMUST00000022225 Phactr4Q501J7 694 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 PnocQ64387 187 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Epn1Q80VP1 575 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Leng8Q8CBY3 785 aaKnown RBP13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Baiap2l1Q9DBJ3 514 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Zc3h13E9Q784 1729 aaKnown RBP13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Scgb2b19J3QM75 112 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Iws1Q8C1D8 766 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Gle1Q8R322 699 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Lama4P97927 1816 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Col1a2Q01149 1372 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Gm29094F6Q785 221 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Nap1l2P51860 460 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Serpinb6dQ3UWK8 375 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Camsap3Q80VC9 1252 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Ccdc40Q8BI79 1192 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Chchd3Q9CRB9 227 aaKnown RBP13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 MthfsQ9D110 203 aa13.99□□□□□ -0.17
Trim23-201ENSMUST00000022225 Trim30cD3YVI9 513 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Vmn2r78K7N6U5 853 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Il27raO70394 623 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Hspd1P63038 573 aaKnown RBP13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Spats2Q8K1N4 545 aaKnown RBP13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 N4bp2F8VQG7 1678 aaKnown RBP13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 A0A0U1RNP2 1173 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Tcp11Q01755 566 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Lmod1Q8BVA4 595 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Eif3hQ91WK2 352 aaKnown RBP13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Col16a1Q8BLX7 1580 aa13.98□□□□□ -0.17
Trim23-201ENSMUST00000022225 Ccdc129Q14B48 1034 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Nlrp9bQ66X22 1003 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Acnat2Q8BGG9 420 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Anks1bQ8BIZ1 1259 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Lmbrd2Q8C561 694 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Wdr60Q8C761 999 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Pth1rP41593 591 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Paf1Q8K2T8 535 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Kank3Q9Z1P7 791 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Neurod6P48986 337 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Eif3j1Q3UGC7 261 aaKnown RBP13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 CtcfQ61164 736 aaKnown RBP13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Ift88Q61371 824 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Eif3j2Q66JS6 263 aa13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Gnl3lQ6PGG6 577 aaKnown RBP13.97□□□□□ -0.17
Trim23-201ENSMUST00000022225 Six6os1Q9CTN5 574 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms