RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Ces3bQ8VCU1 571 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Klc3Q91W40 508 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 AmfrQ9R049 643 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pde3aQ9Z0X4 1141 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pcdh10E9PXQ7 1057 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Mctp2Q5RJH2 878 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Nat10Q8K224 1024 aaKnown RBP13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Klf15Q9EPW2 415 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Irs4Q9Z0Y7 1216 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Hdac6Q9Z2V5 1149 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Otud7bB2RUR8 840 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cyp2c23E9Q5K4 494 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ampd3O08739 766 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cdk4P30285 303 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Capza3P70190 299 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cnga2Q62398 664 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Tbc1d5Q80XQ2 815 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Csrnp2Q8BGQ2 534 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Etf1Q8BWY3 437 aaKnown RBP13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Etnk1Q9D4V0 363 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 PplQ9R269 1755 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Prl3d1P18121 224 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Gjc1P28229 396 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ift88Q61371 824 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Esco1Q69Z69 843 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Nek9Q8K1R7 984 aa13.07□□□□□ -0.32
Herc4-201ENSMUST00000020258 Matr3Q8K310 846 aaKnown RBP13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Vnn1Q9Z0K8 512 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Usp53P15975 1069 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ccdc174Q3U155 467 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Zc3h12cQ5DTV4 884 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 RarsQ9D0I9 660 aaKnown RBP13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Adgrb1Q3UHD1 1582 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Btn2a2A4QPC6 514 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Hdgfl1Q2VPR5 283 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Trak2Q6P9N8 913 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ppp2r2cQ8BG02 447 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Myl6bQ8CI43 207 aa13.06□□□□□ -0.32
Herc4-201ENSMUST00000020258 Palm3A2TJV2 734 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cyp26c1B2RXA7 518 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Nmt2O70311 529 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Nap1l1P28656 391 aaKnown RBP13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Atp8a2P98200 1148 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cep112Q5PR68 954 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Brd3Q8K2F0 726 aaKnown RBP13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 BaatQ91X34 420 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ahnak2E9PYB0 1738 aaKnown RBP13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ankk1Q8BZ25 745 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Eno4Q8C042 619 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Slc14a2Q8R4T9 930 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Col16a1Q8BLX7 1580 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Phldb3E9QAF4 648 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 PparaP23204 468 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Dpf2Q61103 391 aaKnown RBP13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Tbc1d30Q69ZT9 766 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Epc1Q8C9X6 813 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 CenphQ9QYM8 241 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Mroh6V9GX81 722 aa13.05□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pik3c2aQ61194 1686 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cdc27A2A6Q5 825 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 PpardP35396 440 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Rad23bP54728 416 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Slc7a3P70423 618 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Specc1lQ2KN98 1118 aaKnown RBP13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Wdr70Q3TWF6 657 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Usp50Q6P8X6 390 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Glis3Q6XP49 780 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ccdc93Q7TQK5 629 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Rapgef3Q8VCC8 918 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cfap45Q9D9U9 551 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Cbx6Q9DBY5 414 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pde11aP0C1Q2 933 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Snrpa1P57784 255 aaKnown RBP13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Erich4Q3UNU4 136 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Prl2c1Q5SVL9 228 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ndufb9Q9CQJ8 179 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Lmbr1Q9JIT0 490 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Hic2Q9JLZ6 619 aaKnown RBP13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Slit3Q9WVB4 1523 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 CltaO08585 235 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Anks1aP59672 1150 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Jakmip3Q5DTN8 844 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Slc27a1Q60714 646 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Panx2Q6IMP4 677 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 HelbQ6NVF4 1074 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Rnf41Q8BH75 317 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Galntl5Q9D4M9 431 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Arpp21Q9DCB4 807 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Kdm3aQ6PCM1 1323 aa13.04□□□□□ -0.32
Herc4-201ENSMUST00000020258 Nfil3O08750 462 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Epha2Q03145 977 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 IqcgQ80W32 419 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Olfm5Q8BU90 496 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 ZgpatQ8VDM1 511 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Sik3Q6P4S6 1311 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Map2P20357 1828 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 MarcksP26645 309 aaKnown RBP13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Tekt3Q6X6Z7 490 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Slc13a4Q8BZ82 625 aa13.03□□□□□ -0.32
Herc4-201ENSMUST00000020258 Lrrd1Q8C0R9 853 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms